Francisella philomiragia GA01-2794: LA55_1116
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Entry
LA55_1116 CDS
T03620
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz03420
Nucleotide excision repair
fpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA55_1116
03430 Mismatch repair
LA55_1116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpz03400
]
LA55_1116
Enzymes [BR:
fpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LA55_1116
DNA repair and recombination proteins [BR:
fpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA55_1116
MMR (mismatch excision repair)
Other MMR factors
LA55_1116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
DEAD
AAA_12
AAA_11
PhoH
AAA_30
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJI52936
UniProt:
A0A0B6D278
LinkDB
All DBs
Position
complement(1154631..1156691)
Genome browser
AA seq
686 aa
AA seq
DB search
MQYTAEQQKIINHDLDKHALVSAVAGSGKTQTLIARIEYLIDNKVPPNKILVLMYNKSAQ
LDFAERLRKVIKVDIARLVNVRTMHSLGNSFLQAFAKAGFVKADKILKEYEIDAIISKLL
KLYQREFKITKDIDNERVETFKEYISLLKSDLSLTNRKLSELNAKEKKLLDKVFLEFSKE
CEQQKAITYDDMIYLPAKLFEKDKNSIAQASSLYSHIIIDEYQDINQAQQFFLKCLVGQN
TYVMAVGDVDQTIYQWRGSTPYYMLEGFKKDFKNVRQYSLSYTFRYGDLVSLMANNIITN
NKKRHDNLCITYPKLDKTTDISILDSSDKVVLKLKALINSGVKASDIAILVRKYNSTTVF
ELSCLYHDLAYNVVADKNIFSENLFKAIYGYLMLFNKGQGFAKHSIEQRIEFIKSMLDYP
SLYLKKDVKQSLANKIAQDISASMNIISELTKTVDKPFKEKNILAVSGSWRAIFNNTRIK
KSERAISFILETLDLEKQISKVSGETHSSKSKLQIIDGMSSFAKGKKSSLSEFIELLYEL
YIKSNQQGENDPNQIQIMSMHRAKGLEWDYVVVHDATEGGFFGEKNSKACDETIEEERRL
FYVAITRVKKHLFIVSSDDINRLSSWYEIKKNTYPKDLKCKNSLRFLYEGNLIDCQNHLE
TINNINIEDNKFSNKIFKRYYEGLSK
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atgcagtatacagctgaacaacaaaaaattataaatcatgatttggataaacatgcttta
gtttctgcggttgccggcagtggaaaaactcaaactttaatagcaagaattgagtatcta
attgacaataaagttccaccaaataagatattggttctaatgtataacaaatcagcccaa
cttgattttgcagaaagacttagaaaagttattaaagttgatattgcaaggttagttaat
gtaagaacaatgcattcattaggaaatagtttcttgcaagcttttgcaaaagcaggattt
gttaaggcagataagattcttaaagagtatgaaatagatgcaattatttcaaagctactt
aagctatatcaaagagaatttaaaataactaaagatattgataacgaaagagttgaaaca
tttaaagagtatatttcattattgaaatcagacttatctcttactaacagaaaactcagt
gaacttaatgctaaagagaagaagcttttagataaagtgtttttagagtttagcaaagaa
tgtgagcaacaaaaagctattacttatgatgatatgatttatcttcccgcaaagcttttt
gaaaaagataaaaatagcatagctcaagcaagtagcttatattctcatataatcatagat
gaatatcaggatatcaatcaggcacaacagttttttttgaagtgtttagttggacaaaac
acttatgttatggccgtaggagatgttgatcagacaatatatcaatggcgtggttctact
ccatattatatgttagaaggtttcaaaaaagattttaaaaatgtaagacaatacagcctt
tcttatacttttagatatggtgacttagtatctttgatggccaataatattattactaat
aataaaaaacgccatgataatctatgtattacataccctaaactagataaaacaacggat
attagtattcttgatagtagtgataaagtagttcttaagcttaaagcattgatcaatagt
ggtgtaaaagctagcgatatagctattcttgtacgtaaatataactcaacaactgtattt
gaattgagttgtttgtatcacgatctagcttataatgtggtggctgataagaatattttt
agtgaaaacctatttaaagctatatatggatatttgatgctatttaataagggtcaggga
tttgctaaacatagtattgaacaacgaattgagtttataaaatcaatgcttgattatcca
tcactatatctcaaaaaagatgttaaacaaagcttggcaaataaaatagctcaagatatt
tcagctagcatgaatataatttcagaattgactaaaacagttgataaaccatttaaagaa
aaaaatattttagcagtatctggtagttggagagctatttttaataatactcggattaaa
aagtcagaaagagcgataagttttatattagaaactctagatcttgaaaaacaaatttct
aaagtctctggagagacgcattcaagcaaatctaaattacaaattatagatggaatgagt
agttttgctaaaggtaagaaaagttcattatcagaatttatcgaacttttatatgagcta
tacataaaatcgaatcagcagggtgaaaatgatccaaatcagatccagatcatgtcaatg
catagagccaaaggtttagagtgggattatgttgttgtacatgatgctacagaaggaggc
tttttcggtgaaaaaaattctaaggcttgtgatgaaacaatcgaagaggagcgaagatta
ttctatgttgctattacacgagttaagaaacatttgttcatcgtatcttcagatgatatt
aatcgtttatcatcatggtatgagatcaaaaaaaatacctacccaaaagatttgaaatgt
aaaaatagcttgagattcttatacgaaggcaatttaatagactgtcaaaatcatttagag
acaattaataatatcaatattgaggataataaattttctaacaagatttttaaacgttat
tatgaaggtttatcaaagtag
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