Francisella philomiragia GA01-2794: LA55_1324
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Entry
LA55_1324 CDS
T03620
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
LA55_1324 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpz03400
]
LA55_1324 (uvrB)
DNA repair and recombination proteins [BR:
fpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
LA55_1324 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA55_1324 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
DEAD
UVR
Kinesin
AAA_30
eIF3_p135
SWI2_SNF2
Microtub_bd
AAA_22
DUF87
PMT2_N
Motif
Other DBs
NCBI-ProteinID:
AJI53571
UniProt:
A0A0B6D3W8
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All DBs
Position
complement(1349008..1351014)
Genome browser
AA seq
668 aa
AA seq
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MNKFNLVTKYAPAGDQPKAIKSLVEGVNNGLQHQVLLGVTGSGKTYTMANVIQQTQKPCL
IVAHNKTLAAQLYSEFKQYFPDNAVEYFVSYYDYYQPEAYVAASDTYIEKDSSVNEHIEQ
MRLSATKAILERNDVIIVATVSAIYGLGDPEQYMQMLLHLKVGEELGLKKAQTKLVEMQY
SRNDMDFSRGSFRVRGEVLDIFPADSEKDAIRVEFFDDEIEAISVIDSLTSKKIKTLHRA
TIFPSTHYVASKERKDIVIEEIKAELKERVKYFEEEGKLLEAQRIEQRTKYDIEMIQELG
YCTGIENYSRLLSGRALGDPPPTLIDYLPENALVIVDESHVTLPQFGGMYKGDLSRKSNL
VNYGFRLPSALDNRPLKFNEFENLLPQTIYVSATPANYELEKSQNTVEQVIRPTGLLDPE
VFVRPVAIQVEDALSEINKAIAKEERILITTLTKKMAENLTEYLSEHGVNVRYLHSDIDT
VERVQIIHDLRHGVFDVLVGINLLREGLDMPEVGVLLIFDADKEGFLRSEKSLIQTIGRV
ARNQNGRAILYADVVTKSMKKAMDETLRRRKLQDEYNQKNNITPKTIIKSIDDMLDSSPE
MQKRAYKNNSRLKVDDVDVSAILGMTEASKVIKALEKRMRAYAKELEFEQATAIRDKITE
IKQKFINL
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgaataaattcaacctagtaacaaagtatgctccagctggagatcagccaaaggcaatt
aaatcattagtagaaggtgttaataatggattacagcatcaggttttgttaggagttaca
ggttctggtaaaacatatactatggcaaatgtgattcaacaaacacaaaaaccatgtttg
attgttgcacataacaaaactttggcagctcaattatattcagagtttaagcaatatttc
ccagataatgcagttgagtattttgtgtcatattacgattattatcagccagaagcgtat
gttgcagcttctgatacctatatagaaaaagattcatctgtaaatgagcatattgaacaa
atgcgtttgtcagctacaaaagcaatacttgagcgtaatgatgtaattatagtcgcaacc
gtatcggctatttatggtctaggcgatcctgagcagtatatgcaaatgcttttgcaccta
aaagtaggtgaagagctagggctaaaaaaagctcaaactaagttagtagagatgcaatat
tcgcgtaatgatatggatttcagtcgtggtagttttcgagttaggggagaggtattagat
atattcccagcagactctgaaaaagatgctattcgagtagagttttttgatgatgagatt
gaagcgataagtgtgatcgactcattaacttcgaaaaaaattaaaacattacacagagca
acaatattcccaagtacacattatgttgcatcaaaagagcgcaaagatatagttatagaa
gagatcaaagcagaacttaaagaaagagttaaatattttgaggaagaaggtaaattactt
gaagctcaaagaatagaacaacgtactaagtatgatattgaaatgattcaagagcttggc
tactgtacaggtatcgaaaattattcaagattattatcaggtagagctcttggtgatcca
ccaccaacattgattgactacttaccagaaaatgccttagttatagttgatgagtcgcat
gtgacattaccacagtttggtggaatgtataagggggatttatcgcgtaagtcaaacctc
gttaactatggttttaggttaccttctgctttggataatagacctttgaaatttaatgag
tttgagaatttgttgcctcagacaatatatgtatctgcgacaccagctaattatgaactt
gaaaagtctcaaaatactgtagagcaagtaatcagaccaactggtttattagatcctgaa
gtctttgtaagacctgtagctatacaagtagaagatgctttatcagagataaataaagct
atagccaaagaagaaagaattttgataactactttaaccaaaaaaatggcagagaattta
acagagtatctatctgagcatggtgttaatgttagatatctacattctgatattgatact
gttgagagagtccaaattattcatgatttacgtcatggtgtatttgatgtgctagtgggt
atcaaccttcttagagaggggcttgatatgccagaggtcggagttttattaatttttgat
gctgataaggaagggtttttgcgttctgagaaatctcttattcaaactatcggacgcgtg
gctagaaaccaaaatggtagagctattttgtatgcggatgttgttacaaaatctatgaaa
aaggctatggatgaaactctacgtcgtcgtaagcttcaggatgaatataatcagaaaaat
aatattacgcctaaaacaatcatcaagagtatagatgatatgttagatagttctccagag
atgcaaaaacgtgcatataaaaataattcgcgcttaaaggttgatgatgtagatgtttcg
gctatactaggtatgactgaagcttcgaaggttattaaagctctagaaaaacgaatgaga
gcttatgcaaaagagcttgaattcgagcaggcaacagcaattagagacaagataactgaa
attaagcagaagtttattaatttataa
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