Francisella philomiragia GA01-2794: LA55_1325
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Entry
LA55_1325 CDS
T03620
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
LA55_1325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpz03400
]
LA55_1325
Enzymes [BR:
fpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
LA55_1325
DNA repair and recombination proteins [BR:
fpz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
LA55_1325
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LA55_1325
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LA55_1325
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
ExoI_C
MIB_arm
ExoI_SH3
Motif
Other DBs
NCBI-ProteinID:
AJI52382
UniProt:
A0A0B6D236
LinkDB
All DBs
Position
complement(1351015..1352463)
Genome browser
AA seq
482 aa
AA seq
DB search
MFQNQTFLFYDLETTGINNSFDQVLQFAAIRTDLDFNEIERFNFFVKLNPDTTPSPIATI
THHISIAQANTGVSEYQAIRKIHKIINTPRTISIGYNTLGFDDEFLRFAFYKNMLPPYSH
QFKNGCSRADLFPIVTCYYLFCNDVLKWPKALDEEGQQKISLKLENLNTENNLYSGGRAH
DAITDVIVTVELAKKLRIANPKMWQFLLAKFNKQNDENTLAQLDVGLEVGGVEYRQAIAV
SGVFGFKNNFMSAILDIGQHRHYKNQEIFLRLDSYDFKDFIEEFGGLEAEHWRLTVNKKW
GDIPLILPAKTRFVGRLPQDRLDLIKTNKEFIRSNPEIFANFVDYVLEYKYPEIENVDID
AAIYQSDFMSVADERGCDKFHTLPIHQKSQMLNQLPKSYYDRAVRIIGRLDFSKLPDKAQ
MEFQDYLNKIVSLDNDELLIDHKGKTRKTLEDIYQEMQDLRMNRDLTEEQQALLYELEEY
LF
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaaatcaaacttttttattttatgacttagaaactactggtattaataattct
tttgaccaagtattacaatttgctgcgattcgtacagatttggactttaatgaaattgaa
aggtttaatttttttgtgaagctaaaccctgatacaaccccatctccaattgcaacgata
acgcatcatatttctattgctcaagcaaatacgggtgtgtcagaatatcaggcaattaga
aaaattcataaaatcataaatactccaaggactattagtatcggttataatacccttggt
tttgatgatgagtttttgagatttgctttttataaaaatatgctacctccatatagtcat
cagtttaaaaatggttgttcaagggctgatttgtttccaatagttacttgctattattta
ttttgtaatgatgttcttaagtggcctaaagctcttgatgaagaaggacagcagaaaata
tctttgaagttagaaaatttaaatactgaaaataatctctatagtggtggtagagctcat
gatgctattacagatgtaattgtcacagtagagttagctaaaaagttaagaatagctaat
cctaaaatgtggcagtttttattggcaaagtttaataagcaaaatgatgaaaatacttta
gctcaattagatgttggtttagaagtaggaggtgttgagtatagacaagcaattgctgta
agtggagtttttggctttaaaaataattttatgtccgcaatattagatattggtcaacat
aggcattacaaaaatcaagagatatttcttcgcttagatagttatgattttaaagatttt
atagaagagtttggcggtttagaagcagaacattggcgattgactgtaaataagaaatgg
ggtgatattccgctaatattacctgctaaaacccgttttgtggggaggttgcctcaagat
agactagatttgataaagacgaacaaagaatttataagaagcaatccagaaatatttgct
aattttgtcgattatgtattggaatataagtatccagagattgaaaatgttgatatagat
gcagcaatttatcaaagtgactttatgagtgtcgctgatgaaagaggttgtgataaattc
cacacattaccaattcatcagaagtctcaaatgcttaatcagttaccaaagtcttattat
gacagagctgtacgtataattggtagattagacttttcaaaactacctgataaagcacag
atggagtttcaagattatctaaataagattgttagcttagataatgatgagcttttgatt
gaccataagggtaaaactcgcaaaactttggaagatatctatcaagaaatgcaagattta
cgcatgaatcgtgatctaacagaagaacagcaagctttgctatatgagttagaggagtat
ttattttag
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