Francisella philomiragia GA01-2794: LA55_770
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Entry
LA55_770 CDS
T03620
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz02024
Quorum sensing
fpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA55_770 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA55_770 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpz03019
]
LA55_770 (hfq)
03036 Chromosome and associated proteins [BR:
fpz03036
]
LA55_770 (hfq)
Messenger RNA biogenesis [BR:
fpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
LA55_770 (hfq)
Chromosome and associated proteins [BR:
fpz03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
LA55_770 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
LSM
Carmo_coat_C
Motif
Other DBs
NCBI-ProteinID:
AJI53894
UniProt:
A0A080QA67
LinkDB
All DBs
Position
795103..795432
Genome browser
AA seq
109 aa
AA seq
DB search
MSRISSLQDPFLNALRKEKVSVSVYLVNGIKLQGQVEAFDQFCIVLRNTVNQMVYKHAIS
TIVPAKSVRMVYSSFNPYHQNANDDQDENVDDIHSDELEVQENQENINE
NT seq
330 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagaatatcatctttacaagacccgttcttaaacgctctaagaaaagaaaaagtt
agcgtatctgtatatctagttaacgggatcaaactacaaggtcaagtagaagcttttgac
caattctgtatcgtacttagaaatactgtaaaccaaatggtttacaagcatgctatttct
actatagtaccagctaagagtgttagaatggtttatagctcttttaacccgtatcatcaa
aatgcaaacgatgatcaagatgagaatgtagatgatattcattctgatgagcttgaagtt
caagaaaatcaagaaaacataaacgaataa
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