Francisella philomiragia GA01-2794: LA55_885
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Entry
LA55_885 CDS
T03620
Name
(GenBank) HRDC domain protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
fpz
Francisella philomiragia GA01-2794
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpz03016
]
LA55_885
Enzymes [BR:
fpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LA55_885
Transfer RNA biogenesis [BR:
fpz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LA55_885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
Motif
Other DBs
NCBI-ProteinID:
AJI53682
UniProt:
A0A0B6D5U3
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Position
complement(914245..915345)
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AA seq
366 aa
AA seq
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MIINTNKKLENIVQTLKNTKEIAVDTEFYWMRTYYPELCLVQIATENEIFLIDTLEDLDF
SKLRDIFEDTGIQKIIHSATNDIPIIKRFFNCEVNNIFDTQLAASFLGTQSQISLKALLK
DILDIEMEKESQFSDWRKRPLSQKQFDYALKDVEHLIEIKHHLEEKLNQTDYKQYFYEEL
LEIQKTEFNTVENIHNKIGNIQKFDEKTQKNAILVAQWRESIAQQKNIPVRFIFDNKILY
AIAHKNPKSLNSFDSEELKKLKPWIKKSVITALNSKHNLEHINLEQKSGAKISTEINDKI
TNFFDIETRSFKFDASLIASRKDIRSVAYNLSIDPNYSSNKLLVGWRYEIVGKKLKEYIL
DTIKNI
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgataattaatacaaataaaaaattagagaatattgtacaaactctcaaaaatactaaa
gaaatagctgtagatacagaattttactggatgcgaacatattacccagagctttgtctt
gtacaaatagctactgaaaatgaaatctttttgatagatactcttgaagatcttgatttt
agtaagcttagagatatttttgaggatacaggtatccaaaaaataatccattctgcaaca
aatgatatccccattataaaaagattttttaattgtgaagtaaataatatttttgatact
cagcttgcagcttcatttttaggtactcaatcacagatatctctcaaggctctactcaaa
gatatattagatattgaaatggagaaagaatcacagttctcagattggcgtaaaagacca
ctttctcaaaagcagtttgactatgccctaaaagatgttgagcatcttatagagatcaaa
catcatcttgaggagaaacttaatcaaactgactataaacagtacttctatgaagaacta
ttagagatacaaaaaacagaatttaacactgttgagaacatccataataaaattggtaat
atccaaaaatttgacgagaaaactcaaaaaaatgccatattagtagctcaatggcgcgaa
tctatcgctcaacaaaaaaatattcctgttagatttatttttgataataaaattctttat
gctatagcccataaaaatcctaagtctttaaactcgtttgattctgaagagctaaaaaaa
cttaaaccttggatcaaaaaaagtgtcataacagctcttaactctaaacataacttagag
catataaatttagagcaaaaatctggagctaaaatatccactgagataaatgataaaata
actaatttttttgatattgaaacaagaagcttcaaattcgatgcctccttaatagcatca
agaaaagatattcgctcagtagcatataatcttagtatcgaccctaactactcgagtaat
aagctattggttggttggagatatgaaatagttggtaaaaaattaaaagagtatatactt
gataccataaaaaatatataa
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