Francisella philomiragia GA01-2794: LA55_899
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Entry
LA55_899 CDS
T03620
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
fpz
Francisella philomiragia GA01-2794
Pathway
fpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LA55_899
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpz03019
]
LA55_899
03009 Ribosome biogenesis [BR:
fpz03009
]
LA55_899
Enzymes [BR:
fpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LA55_899
Messenger RNA biogenesis [BR:
fpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LA55_899
Ribosome biogenesis [BR:
fpz03009
]
Prokaryotic type
rRNA helicases
LA55_899
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_30
Utp25_C
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AJI53806
UniProt:
A0A0B6D4K7
LinkDB
All DBs
Position
927270..929015
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AA seq
581 aa
AA seq
DB search
MNSETKKDFSQLGLNQDIIDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAA
FALPLINNMDLESRDRAPQVLVLAPTRELAIQVAEQFEAFAKNIPNLDVACIYGGQEYGS
QIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDDVRYVLSHV
SDECQRLLFSATIPTDIADIIQEYLRNPCKIQVKAKTKTANTVTQKFIVIKGFRKIDALD
RLLEVEETDGVIIFVKTKTSTIEVADNLKALGYRVAAINGDMQQSQREYIVDQFRSAKSD
VLVATDVVARGIDLERISHVINYDMPNDSDTYVHRIGRTGRAGREGISISLVPLKEMRFL
RTLERFTGSPMQEVFMPSAKDLAQSRIDHFKTRIASALDKNKSLDNYKEIITGIRDELEL
DSDELLAVLTLLAQGKKSFFPREIQARDDRPQRDRNLRGNSRDGRRNDRFERRGDRNDRN
SRFDRSDKFDRSDRPDRKPRRTVNIDLTTYKLEVGRDNDVQPRNIVGAIANEGNIDSKHI
CNISIQKDHTLVDLPANLSPKVISHLRNVWVAGKKLNLTAQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaattctgaaactaaaaaagattttagtcagcttgggctgaaccaagatattatagat
actgttataaaattaggatatgaaaatccaacaccaattcaacagtatgctattccatat
atcttatcgggtagagatgtgcttggtcaagcacaaacgggtacgggtaaaacggcggct
ttcgcattacctttaataaacaatatggatttggaatctagagatagagctccacaagtt
ctggtactagctccgacaagagagttagctatacaagtagcagagcaatttgaagctttt
gctaaaaatataccgaatctagacgttgcgtgtatctatggtggtcaagaatatggttct
caaataagagcacttaagcaaggtgtaaaagttgtagttggtacaactggtcgtgtgatg
gatcatatcgaaaaaggtacattacagctggataatctaagagcgttagtattagatgaa
gctgatgagatgcttagaatgggctttattgatgacgttagatatgttctaagtcatgta
tcagatgagtgtcaaagattacttttctcagcgactattcctacggatatagctgatatt
attcaagaatatctaagaaatccttgtaagatacaagtaaaagcaaaaacaaaaactgca
aatactgtgacacaaaagttcatagtgattaaaggctttagaaagatagatgcgttagat
agattacttgaagttgaagaaactgatggtgttattatctttgttaaaactaagacaagc
actattgaagtagctgataatctaaaagctcttggttatagagtggcagctattaatggt
gatatgcaacaatctcaacgtgaatatatagttgaccaatttagaagcgctaaatctgac
gttttagtagctacagatgttgttgctagaggtatagatcttgagcgtattagccatgta
attaactatgatatgcctaatgattctgatacgtatgtacatagaatcggtcgtacaggt
agggctggacgtgagggtatttcaatttctctagttcctttgaaagaaatgagatttttg
cgtactttagagagatttacaggctctccaatgcaagaagtgtttatgccaagtgcaaaa
gatttagcacaaagcagaatagatcatttcaaaactcgaatagcttcggcattagataaa
aataaatctctagataattataaagaaattatcacgggtatacgtgatgagctagagtta
gattctgatgagcttttggctgtacttacattattagctcaaggtaagaaatcattcttc
ccgagagaaatacaagctagagatgatagacctcaaagagatagaaatttaagaggcaac
tctagagatggacgcagaaatgatagatttgagcgtagaggcgatcgtaatgatagaaat
agtcgttttgatagatctgataaatttgacagatcagacaggcctgatagaaaacctcgt
agaactgtaaatattgatttgactacatataagcttgaagttggccgtgataatgatgtt
cagccaagaaatatagtcggtgctatagctaatgaaggaaatattgatagtaagcatatc
tgtaatatatctatccaaaaagatcatacattagtagatttaccagctaacttatctcca
aaagttataagtcacctgagaaatgtttgggttgcgggcaaaaaattaaatcttacagct
caataa
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