KEGG   Frankia casuarinae: Francci3_0017
Entry
Francci3_0017     CDS       T00320                                 
Name
(GenBank) CRISPR-associated helicase, Cas3 family
  KO
K07012  CRISPR-associated endonuclease/helicase Cas3 [EC:3.1.-.- 5.6.2.4]
Organism
fra  Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:fra00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:fra02048]
    Francci3_0017
Enzymes [BR:fra01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Francci3_0017
Prokaryotic defense system [BR:fra02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Type I signiture cas proteins
    Francci3_0017
SSDB
Motif
Pfam: Cas3_HD Cas3-like_C_2 Cas3_C DEAD Helicase_C
Other DBs
NCBI-ProteinID: ABD09411
UniProt: Q2JH31
LinkDB
Position
22428..25316
AA seq 962 aa
MGLSIISGMGVFMDDEFFGMIWGKSAEKAGGSMHLLLGHLLDTAAVGELVWDRFLASTIR
DRLDDCSDGRGRSLFALLCGLHDVGKATPAFQMKDEGLAQRVRAAGLGWRGVTPQQGRQW
HHARAGAVIVRKYLPQVGWSRPGCDWVWPLVAGHHGLIPDRGRLVHKPAVHGAGPWLDVQ
RAFVDRVAGDLNVDLASFSELRTPSRGGQLALSGMIIMADWVASDKEHFGGLSDLAEISM
KGSRERAQRAWAQLGLRGGWRSDRPAPGNQSDLVHHRFGKPARPAQRAAVQAVREMPGPG
LLILEAPMGEGKTEAALAAAEVLAGKVGADGVFVGMPTQATSDPMFSRVRGWLTAVDPEV
PIGLLHGRARFNKEWAALRSQVRFVDVHDDLDEYGMADDFGTGTSGPGRRDAPLAGAAAA
AEWFFGSKRGLLAAVTVGTVDHLLQAATRTKHVMLRHAGLAGRVVILDEVHAYDVYMAQF
LFEALRWLADTGVPVIVLSATLPPVLRAQLAGAYLQGALQRPDVDLADLPRPTGYPSTTA
VYMADGKPRFSVTSQSPWRESVPVAVEILAEPTDFAPVSIAAAVSAEVSEGGCALVVCNT
VQRAQVVYAELRTTFGDDVVLLHSRFTAAERASRTEDVVDKLGPPGRENAQDRPARLVVV
ATQVAEQSFDVDVDILVTDLAPIDLLLQRVGRLHRHDRPTGQRPARLRDPKVIVSGLRLP
DGAVPLWPAGSRAVYGDHLLLRSAALVAEAATGGGWSIPADVPGLVALGYGDEPLGPARW
ADAAAEARQEWEAKERRRRVNATGFLLSGEDGLGLTTLEGLHDKATAPLETEERLTAVVR
DSDESVEVVLVRRGPAGYLTLAGRSLGHIGEVAVSDDAVLEEVVGATIRLPANKEITAAA
HAELTPLAGWDGDSWLRRTRALILDDRMSAILGGRHLTYDNKLGLSLAPRPAADTRPAAG
KG
NT seq 2889 nt   +upstreamnt  +downstreamnt
atggggctgtccattatatctgggatgggagtcttcatggatgatgagttcttcggtatg
atatgggggaagtcggcggagaaggcggggggatcgatgcacctgctcctcggccatctt
ctggatacggcggcggtgggcgaacttgtctgggatcgtttcctcgcatccaccattcgg
gatcgtctggatgattgcagcgatggtcgcgggcggtctctgttcgcgctgttgtgcggc
ctgcatgatgtcggtaaggccacgccggcctttcagatgaaggacgagggtttggcgcag
cgcgttcgggctgccgggcttggctggcgaggggtgactcctcagcagggccggcagtgg
catcacgcgcgggcgggggctgtcatcgtccgcaagtatctcccgcaggtcggttggagt
cggccggggtgtgactgggtgtggccgctggtcgcgggccatcacggcctgataccggac
cgtggccgtcttgtgcacaagcccgccgtccacggcgccggaccgtggctcgacgtccaa
cgtgcgttcgtcgaccgggtggccggcgacctcaacgttgacctggcttccttttcggag
ctgcgaacaccatcccgcggaggtcagcttgccctatccgggatgatcatcatggcagac
tgggtcgcgagcgacaaagagcatttcggtgggctgtcggatctggcggagatctcgatg
aagggctcgcgggagcgtgcacagcgagcctgggcacagttgggtctgcgtggcgggtgg
cgctccgaccggcccgcacccggcaaccagtctgacctggtgcaccacagattcggtaag
ccagcccggccggcgcagcgcgccgcggtccaggccgtgcgggaaatgcccggccccggg
ctactgatcctggaagcgccgatgggtgaggggaagacggaggcggcgctcgccgccgcg
gaggtactggccggcaaggtcggtgcggatggggtgttcgtcggaatgccgacgcaggcg
acgagcgatccgatgttcagccgggtccgcggctggctcaccgcggtggatcccgaggtt
ccgatcggcctactgcacggccgggctcgtttcaacaaggagtgggcggcacttcggtcg
caggtccggttcgtcgacgtgcatgacgatctcgacgagtatgggatggccgacgatttc
ggtacgggtacgagcggcccgggtcgtcgcgacgcaccgctggcgggcgccgcggcggcc
gcggagtggttcttcggatcgaaacgggggttgctcgctgcggtgacggtcggcacggtg
gatcacctgctgcaggcggcgacccggacgaagcatgtgatgctacggcacgccggcctg
gccggccgggtcgtcatccttgacgaggtacacgcctacgacgtctacatggcgcagttc
ctgttcgaggcgttgcgctggctcgccgacaccggcgtgccggtcatcgttctgtccgcg
acgctgccgccggtactgcgtgcacagctcgccggcgcctatctgcagggcgccctgcag
cgccccgatgtcgacctcgccgatctgccgcggcccaccggctacccgagcaccaccgcg
gtgtatatggccgacgggaagccccggttttccgtgacgtcccagtcaccctggcgtgag
tccgtgcccgttgcggtagagatcctggcagagcccaccgacttcgccccggtgagcatc
gccgccgctgtctcggcggaggtgagcgagggcggctgcgctctcgtcgtgtgtaacacc
gtccagcgggcccaggtcgtctacgccgagctgcggacgacgttcggtgatgacgtggtg
ctgctgcactcccggttcaccgcagccgaacgcgcgagccgtacggaagacgtcgtggac
aagctcggcccccccggacgggagaacgcccaggaccggcccgcgcggctcgtcgtcgtg
gccacccaggtggccgaacagtcgttcgacgtcgatgtggacatcctcgtcaccgatctc
gcccccatcgaccttctgctgcaacgggtcggccggctgcatcggcatgaccggccgacc
gggcagcgaccggcccggcttcgcgacccgaaagtgatcgtcagcggtctgcggctgccc
gacggggctgtgccactctggcccgccggtagccgggccgtgtacggggatcatctactg
ctgcgctccgccgctctcgtcgccgaagccgccacgggtggtggatggtcgattcccgcc
gacgtgcccggcctcgtcgctctcggctacggtgatgagcctctcggtccggcgcgctgg
gctgatgccgcggccgaggccaggcaggaatgggaggccaaggagcgtcgtcgccgggtg
aacgccaccggatttctgctttccggcgaggacggtctgggcctgaccacgctcgagggt
ctgcacgacaaggcgaccgcgccgctggaaaccgaggaacgcctcaccgcggtcgtccgt
gacagcgacgagtccgtggaggtcgtcctcgtccgccgcggaccggccgggtatctcacg
ctcgcgggccgatcgctcgggcacatcggcgaagttgccgtgtctgacgacgcggtcctc
gaagaggtcgtcggagccaccatccgcctgcccgcgaacaaggagatcaccgccgcggcg
catgccgaactgactcccctggccggctgggacggcgactcctggctccgccgcacccgc
gccctgattctcgacgatcgcatgtcggcgatcctcggggggcgacacctgacctatgac
aacaagctcgggctgagcctcgcgcctcgaccggctgctgatactcgaccggctgctggt
aaagggtga

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