Frankia casuarinae: Francci3_0196
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Entry
Francci3_0196 CDS
T00320
Name
(GenBank) secretion protein HlyD
KO
K21449
trimeric autotransporter adhesin
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fra02000
]
Francci3_0196
Transporters [BR:
fra02000
]
Other transporters
Pores ion channels [TC:
1
]
Francci3_0196
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Biotin_lipoyl_2
HlyD_3
HlyD_D23
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
ABD09586
UniProt:
Q2JGK6
LinkDB
All DBs
Position
complement(232703..234961)
Genome browser
AA seq
752 aa
AA seq
DB search
MPEGAVSEKAAPEEKPRPSRRRLGRPRKVVVGGTAAVLLAGTGVGTGLAVTAGPGPSYRL
ATASMASVTQALTSVGTVATVNKATLAFPVAGTVTAVPVAIGDQVTAGQTLAGLDPGPLR
RALDAANATLANARLALTADESGQTSSATASGTGPGTFTAAGAVATSLADVTGSSFRGGS
SSAGIELISSSTGRSPAPTPAAAPAGTTDNGTTEPGTLLTAVTTAQQDVENAQSSLDSVL
AGLGADLGKLTSPGGGCVVVAGPPRAPITYTTTPVLAAPSDATGKISGTAGADDAITLLR
DGAVVASVTGSYAFTGLDAGTPYTVKIEDPDPTGSVDALQCQHAIGALVARYSTSPGPSQ
PSDLATLVSQLAAAKLNLDAAVRDLGTAGVPTAGVPTAPAASAIPTEPAQPTQPTQPTQP
ATSSARPLSAPAPWVPGATGGPAPAPSHGPAPSSSGGGSTVRSGSSAGSSRSVGGGTSSG
GTSSGGTSSGGTSSRAARVVTAEQLAADQAAIDAAVAQVALAQQNLAETTLTSPVTGTVA
AVSISPGMTVGAFSSTNAITVLGAGGKQVVTTVPLSAVDLVRPGDRADVTVDGVSTPLTG
TVSSIGVLNSTTGSTTTYPVKIALAATRTKLFDGTGATVSIVVREVRNMLTVPTSAVHRV
GGLSTVSVLRKGKAVTVRVTTGAVGADRTEVTSGLTAGNQVILADLHAALPSARTNSSST
RGGALSGGGGLFGAGGGGGGAGGRGVQRARGG
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggggcagtgtccgagaaggcagcgcctgaggagaagccgcggccgtcgcgc
cgccggttgggtcggccccgcaaggtcgtggtgggcggcacggcagcggtgctgttggct
ggtaccggcgtcggaacggggctcgcggtcacggcgggcccggggccctcctaccggctg
gccaccgccagcatggcgtcggtgacccaggccctcacctcggtcggaacggtggccaca
gtcaacaaggcgacactggcgtttccggtcgccggaacggtgaccgccgtgccggtggcg
atcggtgaccaggtcacggccgggcagacgctggccggcctggacccggggccgctgcgg
cgagccctggacgcggcgaacgcgacgctggcgaacgcgcggctggcactgaccgcggac
gagtcgggccagacctcgtcggcgaccgcttcggggacgggcccgggcacgttcacagcg
gcgggggccgtggccacctccctggcagacgtgacgggcagctcgttccggggcggctcg
tcgtccgccggcatcgaactgatcagttcctcgaccggacgctccccggcgccgaccccg
gcggcggctccagccgggacgacggacaacgggacgacggagccgggcaccctcctgacg
gcggtcaccacagcgcagcaggacgtcgagaatgcccagtcgtccctcgacagcgtgctg
gccggcctcggcgccgatctcgggaagctgacgtcccccggcggaggctgcgtggtggtc
gccgggccgccccgcgcgccgatcacgtacacgacgacgccggtcctcgccgccccgtcg
gacgccaccgggaagatcagcgggaccgccggcgccgacgacgcgatcactctgctccgg
gacggcgccgtggtcgcctccgtgaccggttcctatgccttcaccggtctagacgcgggc
acgccgtacacggtgaagatcgaggatcccgacccgaccggttccgttgacgccctccag
tgccagcacgcgatcggtgccctcgtcgccaggtacagcacatcgccagggccgtcacag
ccgtcggacctggccacgctggtgtcccaactcgccgccgccaaactgaacctggacgct
gcggtccgcgacctcggcacggccggcgttccgacagccggcgttccgacagctccggcc
gcctcggccatcccgaccgaaccagcccaaccaacccaaccaacccaaccaacccaacca
gccacttcgagcgcccgtccgctgagcgcgccggccccgtgggtgccaggtgcgacgggt
gggccggctcccgcccccagccacggtcccgcccccagctcctccggtggaggatcgacc
gtccgctccggaagctcggcgggatcgtcccgcagcgtgggcggcggtacgtccagcggc
ggtacgtccagcggcggtacgtccagcggcggtacgtccagccgggcggccagggtcgtc
accgccgagcagctcgcggccgaccaggccgccatcgacgcggctgtcgcgcaggtggcg
ctggcccagcagaacctggcggagacgaccctgaccagccccgtcaccgggacggtggcc
gccgtctcgatctcacccgggatgaccgtcggcgcgttctccagcaccaacgccatcacc
gtgctcggcgccggtggcaagcaggtcgtcaccacggtcccgctgtccgccgtggacctg
gtgcggcccggcgaccgggccgacgtcaccgtcgacggcgtgtcgacgccgctgaccggc
accgtctcctcgatcggcgtcctgaacagcacaaccgggtcgaccacgacctaccccgtc
aagatcgcactggcggcgacgcggacgaagctcttcgacggcaccggcgcgaccgtgtcg
atcgtggtacgggaggtccggaacatgctgaccgtgccgacctcggcggtgcaccgggtc
ggcgggctgagcacggtctcggtcctgcggaagggcaaggcggtgaccgtccgggtgacc
accggggcggtgggggccgaccggaccgaggtgacgtccggcctcaccgccggtaaccag
gtcatcctcgccgacctgcacgcggcgctgccgtcggcacgcacgaactcatcgtccacc
agaggcggagctctgagcggcgggggcgggctgttcggcgcgggtgggggcggtggcggt
gccgggggccggggcgtccagcgcgcccggggtggctga
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