Frankia casuarinae: Francci3_0610
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Entry
Francci3_0610 CDS
T00320
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fra
Frankia casuarinae
Pathway
fra03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Francci3_0610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fra03021
]
Francci3_0610
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_0610
Enzymes [BR:
fra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Francci3_0610
Transcription machinery [BR:
fra03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Francci3_0610
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Francci3_0610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
ABD09994
UniProt:
Q2JFE8
LinkDB
All DBs
Position
693356..694405
Genome browser
AA seq
349 aa
AA seq
DB search
MLIAQRPTLIEDPISEFRSRFVIEPLEPGFGYTLGNSLRRTLLSSIPGASVTSIRIDGVL
HEFSTVPGVKEDVTDLILNLKELVVSSDNDEPTVMYLRKQGPGEVTAADIAPPAGVEVHN
PELRLATLNDKGKLEIELTVERGRGYVSAAQNKQAGQEIGRIPIDSIYSPVLKVTYKVEA
TRVEQRTDFDRLIVDVETKPSISPRDAMASAGKTLVGLFGLAQELNAEAEGVDIGPSAAD
AALAADLALPIEEMDLTVRSYNCLKREGIHTIGELVSRSEADLLDIRNFGQKSIDEVKTK
LGAMGLQLKDSPPGFDPRQAVDTYGTDAYSPSFSDPSDDGAEFIETEQY
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgctcagcgtcccaccctcatcgaagacccgatctccgagttccgttcacgc
ttcgtgatcgagccgctggagccgggcttcggctacaccctcggtaactcgttgcgccgg
accctgctgtcctccatcccaggtgcctcggtcaccagcatccgcatcgacggcgtgctg
cacgagttctccaccgtgcccggcgtcaaggaggacgtgaccgacctgatcctgaacctc
aaggaactggtcgtcagctccgacaacgacgagccgaccgtgatgtacctgcgcaagcag
ggccccggcgaggtcacggcggcggacatcgccccgccggcgggcgtcgaggtgcacaac
cccgagttgcggctcgccactctgaacgacaagggcaagcttgagatcgagctgaccgtc
gagcgggggcgcgggtatgtcagcgcggcccagaacaagcaggccggccaggagatcggg
cggatcccgatcgactcgatctactcgccggtgctgaaggtgacctacaaggtcgaggcg
acccgcgtcgagcagcggaccgacttcgaccggctcatcgttgacgtcgagaccaagccg
tcgatctccccgcgagacgcgatggccagcgccggcaagaccctggtcggcctgttcggg
ctggctcaggagctcaacgccgaggcggagggcgtcgacatcggcccgtccgccgcggac
gcggcgctggcggccgaccttgcgctgcccatcgaggagatggacctgaccgtccgctcc
tacaactgcctcaagcgtgagggcatccacacgatcggcgagctggtctcccgtagcgag
gccgacctgctcgacatccgtaacttcgggcagaagtcgatcgatgaggtcaagacgaag
ctgggcgcgatgggcctgcagctcaaggactccccgcccgggttcgacccgcgccaggcg
gtggacacctacggcaccgacgcgtacagcccgtcgttctccgacccgtccgacgacggc
gcggagttcatcgagaccgagcagtactga
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