Frankia casuarinae: Francci3_0633
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Entry
Francci3_0633 CDS
T00320
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fra
Frankia casuarinae
Pathway
fra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Francci3_0633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fra03019
]
Francci3_0633
03110 Chaperones and folding catalysts [BR:
fra03110
]
Francci3_0633
03029 Mitochondrial biogenesis [BR:
fra03029
]
Francci3_0633
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fra04147
]
Francci3_0633
Enzymes [BR:
fra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Francci3_0633
Messenger RNA biogenesis [BR:
fra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Francci3_0633
Chaperones and folding catalysts [BR:
fra03110
]
Heat shock proteins
HSP60 / Chaperonin
Francci3_0633
Mitochondrial biogenesis [BR:
fra03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Francci3_0633
Exosome [BR:
fra04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Francci3_0633
Exosomal proteins of other body fluids (saliva and urine)
Francci3_0633
Exosomal proteins of breast cancer cells
Francci3_0633
Exosomal proteins of colorectal cancer cells
Francci3_0633
Exosomal proteins of bladder cancer cells
Francci3_0633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ABD10017
RhizoBase:
Francci3_0633
UniProt:
Q2JFC5
LinkDB
All DBs
Position
715686..717326
Genome browser
AA seq
546 aa
AA seq
DB search
MPKILTFNEDARRALEHGVNALANAVKVTIGPRGRNVVIDKHYGAATITNDGVTIAREIE
LEDPYENLGAQLAKEVATKTNDVAGDGTTTATVLAQEMVRFGLKQVTAGAAPLTLKLGIE
AAVEAVSAALLKQAIEVNSKETIAQVAAISAQDPQVGELIAEAIDKIGKDGVITVEESQT
LGLDLELTEGMQFDKGYISPYFVTDAEAQEAVLEDAYVLLYPGKISALNEILPVLEQVVQ
ERKPLLIIAEEVEGEALSTLVVNSIRKTFQVVAVKAPGFGDRRKALLQDIAVLTGGQVVA
SEVGLSLDAVTLADLGRARRVVVDKDNTTIVDGVGEASSIADRVRQLKQEIEVSDSDWDR
EKLQERLAKLAGGVAVIRVGAATEVELKERKHRLEDAVSATRAAIEEGIIAGGGSALTHV
ASVLDDGLGRTGDELAGVRIVRRALDAPLSWIARNAGLEGAVIVSKVKELEPGRGYNAAT
GEYTDLIAAGVIDPVKVTRSAVANAASIAALLITTEGLVVEKPAEPAPQDGHGHGHGHSH
PQGPGF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagattctgacgttcaacgaggacgcccgccgcgcgctcgagcacggggtgaac
gccctggccaacgcggtcaaggtgacgatcggcccgcgtggtcgcaatgtcgtcatcgac
aagcactacggcgccgcgacgatcaccaatgacggggtgacgatcgcgcgcgagatcgag
ctggaggacccctacgagaacctgggcgcccagctcgcgaaggaagtcgccaccaagacc
aacgacgtggctggcgacggcaccacgacggcgaccgtgctagcccaggagatggtgcgc
ttcggtctcaagcaggtgaccgcgggggccgccccactgacgctgaagctgggcatcgag
gccgccgtcgaggccgtctccgcggcactgctgaagcaggccatcgaggtcaactcgaag
gagaccatcgcccaggtcgccgccatctccgctcaggacccgcaggtcggggaactgatc
gccgaggcgatcgacaagatcggcaaggacggcgtcatcacggtcgaggagagccagacc
ctcgggctggaccttgaactgaccgagggcatgcagttcgacaagggctacatctcgccg
tacttcgtcacggacgccgaggcccaggaggccgtgctcgaggacgcctacgtcctgctc
tacccgggcaagatctcggcgctgaacgagatcctgcccgtgctggagcaggtcgtccag
gagcgcaagccgctactgattatcgccgaggaggtcgagggcgaggccctgtccaccctg
gtggtgaactcgatccgcaagaccttccaggtcgtcgcggtcaaggctcccgggtttggg
gaccgccgcaaggcactgctgcaggatatcgccgtgctcaccggcggccaggtggtggcc
tcggaggtcggtctttccctcgacgcggtgacgttggccgacctgggccgggcccggcgg
gtcgtggtggacaaggacaacaccaccatcgttgacggggttggcgaggcctcctcgatc
gccgatcgggtgcgtcagctcaagcaggagatcgaggtcagcgactccgactgggaccgc
gagaagctgcaggagcggttggccaagctcgccggtggggtcgcggtcatccgcgtcggc
gccgccaccgaggtggagctcaaggagaggaagcaccgcctcgaggacgccgtgtcggct
acccgcgcggccatcgaggagggcatcatcgccggcggcggttccgcgctcacccacgtg
gcgtccgtgctcgatgacgggctcggtcgcaccggggacgagctcgccggggtgcggatc
gtgcgccgcgcgctcgacgccccgctgtcgtggatcgcgcgcaacgctggtctggagggc
gcggtcatcgtctccaaggtcaaggagctcgagccgggtcgtgggtacaacgcggccacc
ggcgagtacaccgatctgatcgcggccggcgtcatcgacccggtcaaggtcacccggtcg
gcggtggcgaacgccgcctcgatcgcggctctgctcatcaccaccgagggcctggtcgtc
gagaagccggcggagcccgctccccaggacggccacggccacggccacgggcacagccac
ccgcagggcccgggtttctga
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