Frankia casuarinae: Francci3_0820
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Entry
Francci3_0820 CDS
T00320
Name
(GenBank) Squalene/phytoene synthase
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
fra
Frankia casuarinae
Pathway
fra00906
Carotenoid biosynthesis
fra01100
Metabolic pathways
fra01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
Francci3_0820
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
fra01006
]
Francci3_0820
Enzymes [BR:
fra01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
Francci3_0820
Prenyltransferases [BR:
fra01006
]
Terpene biosynthesis
Squalene/phytoene synthase
Francci3_0820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
ABD10204
UniProt:
Q2JET8
LinkDB
All DBs
Position
956036..956950
Genome browser
AA seq
304 aa
AA seq
DB search
MSTAAQFPAGRPTVAEAYAACEAVTKEAARNFSYGIRLLPAEKRGALSAVYALARRLDDI
GDGDLPEEAKFAGLAQVRAEVEELGTNSSDDPVFVALADAARRFPIPLEAFIELADGVES
DVRGTTYDTFDDLVGYCRLVAGTIGRLSLGIFGSERATSHRDASGVADALGVALQQTNIL
RDVREDLLGGRIYLPRQELKAAGVELEVDATGRLGGPPDALIAYLRTSAQRAEEWYGRGL
VLLDLLDRRSAACCGAMAGIYLRLNRRIKTDPSAVLDRRLALPGWEKAVVAARSLAGRPE
MRAA
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgcggcgcagttccccgcgggccggccgaccgtggcggaggcgtatgccgcc
tgcgaggccgtgaccaaggaggcggcacgcaacttctcctacggcattcgcctgctgccg
gccgagaagcggggggcgctgagcgccgtctacgcgctcgcccgccgcctcgacgacatc
ggcgacggcgatcttcccgaggaggcgaagttcgccgggctggcgcaggtccgcgcggag
gtcgaggagctggggacgaacagctccgatgatccggtcttcgtcgccctcgccgacgcc
gcccgccggttcccgatcccgttggaggcgttcatcgaactcgccgacggggtcgagagt
gacgtgcgcggcaccacctacgacacgttcgacgatctcgtcggctactgccgcctggtc
gccgggacgatcgggcgtctctcgctcggcatctttggcagcgagcgggccacctcccac
cgcgacgcctcgggggtcgcggacgccctcggggtcgcactccagcagacgaacatcctc
cgggacgtgcgcgaggacctgctcggcggccggatctacctgccgcgccaggagctgaag
gccgccggcgtcgaactcgaggtggacgcgaccggtcgcctcggcggcccccccgacgcg
ctcatcgcgtacctgcggacgtcggcgcagcgagcggaggagtggtatgggcgtgggctc
gtcctgctcgacctgctcgaccggcgcagcgcggcctgttgtggggcgatggccggcatc
tacctgcggctcaaccggcggatcaagaccgatccgtccgcggtgctcgatcgtcggctg
gcgctgcccggctgggagaaggcggtcgtcgccgcccgcagcctcgcggggcggcccgag
atgagggcggcatga
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integrated database retrieval system
