Frankia casuarinae: Francci3_1004
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Entry
Francci3_1004 CDS
T00320
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
fra
Frankia casuarinae
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Ortholog
Paralog
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_4
PAS
PAS_8
PAS_3
Motif
Other DBs
NCBI-ProteinID:
ABD10387
UniProt:
Q2JEA5
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Position
1195983..1198160
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AA seq
725 aa
AA seq
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MRSLPQTARQQGVARFAQAWAREILGASYPAIGLIDVEQRLRALSDRLVDALLAEPFTAD
PAAAVGAAVVEYTFGAADALAGTIEICGTRLLTDLRLGTADGYGARLAALQGGLAQGYAH
ALRERILAGQDSIHRAALHASDARFRMIFTGSAIGILINDGGGRIIDANDAFLRMLGVGP
GQVQGRSIDEFAHPEDARELREAYAAQRTAGPEHIRMEWRFTGIGGSVVWAELTTSCLRD
DDGRCRAQLSMIVDVTDRHLLQNQLRRQARHDPLTGLPNRTVLIERVHELMATGPERCIG
LCFIDLDGFKMVNDSLGHDVGDRLLVAVTDRLRRVLSPEQLLVRMGGDEFVILVADTAGT
ADAVAVAETVLAALASPLRVGDHALSIGASIGIVERPVAGGDYADLLRAADITLYRAKAE
GKGRWALFEAERGARQVTRHTLSTMLPRALEQDQFVVEYQPIIALGDGAGARMAAGAMVG
VEALVRWRHPGLGLLPPDLFIGMAEETGQIVPLGRRVLELACRQARQWQECHPHALFVSV
NLAARQTREAGLVEQVRRILDETGLSPDLLQLELTESAFMGTADEPLRVLRGLAEMGVRI
AIDDFGTGYSNLAYLRRLPVHTLKLAGPFVEGFHSARDADPGDEEIVQTLVTLAHTLRLT
VTAEGVETPMQAERLRAAACDSAQGFLFAPPLTAEEITQRILTRSAGSDRTSSSPTQAAR
AAWAR
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtccctgccccagacagcccgccagcagggcgtcgcgcgcttcgcccaggcctgg
gcccgagagatcctcggcgccagctatccggcgatcggcctgatcgacgtcgagcagcgg
ttacgggcgttgagcgaccggctcgtcgacgccctgctcgccgaaccgttcacggccgac
cctgcggccgcggtcggggctgccgtcgtcgagtacaccttcggcgccgcggacgcgttg
gccggaaccatcgagatctgtggcaccagactgctcaccgacctacgactcgggacggcc
gacgggtacggcgcccggctggcggcgttgcagggcgggctggcccagggatacgcccat
gcgctgcgggagcggatcctcgccgggcaggactcgatccatcgcgcggctctgcacgcg
agcgatgcccgcttccggatgatcttcaccggctccgcgatcggaatcctgatcaatgat
ggaggcggacggatcatcgacgccaacgacgcttttctgcggatgctcggagtcggcccg
ggtcaggtgcagggcaggtcaatcgacgagttcgcgcatcccgaggacgcgagggagctc
cgggaggcctatgccgcccagcggaccgccggaccggagcacatccggatggagtggcgg
ttcaccgggatcggcgggtcggtggtgtgggccgagctgaccacgtcgtgtctgcgcgac
gacgacgggcggtgccgtgcgcagctctccatgatcgtggatgtgactgaccggcatctg
ttgcagaaccagctgcgccgccaggcgcggcacgacccgctcaccggcctgccgaaccgg
acggtactcatcgaacgggtccacgaactgatggccacgggaccggaacgttgcatcggg
ctgtgcttcatcgatctggacggattcaagatggtgaacgacagcctcggccacgacgtc
ggcgaccggttgctcgtcgccgtcacggaccggctgcgtcgggtgctgtccccggagcag
ctcctggtcaggatgggtggtgacgagttcgtgatccttgtcgccgacacagccggcacg
gcggacgccgtcgccgtcgccgagaccgtgctggcggcgctggcgagcccgctgcgggtg
ggtgaccacgcgctgtccatcggagcgagcatcggcatcgtcgaacggcccgtcgccggc
ggggactacgccgatctgctacgggccgccgacatcacgctctaccgggcgaaggcggag
gggaagggtcgctgggccctgttcgaggcggagcgaggcgcccggcaggtgacccggcac
actctgtcgaccatgctgccccgcgccctcgaacaggaccagttcgtcgtcgagtaccag
ccgatcatcgccctcggcgacggtgcgggtgccaggatggccgccggggcgatggtcggg
gtggaggcgctggtccgctggcggcatcctggcctcggtctgctgccccccgatctgttt
atcgggatggcggaggagaccgggcagatcgtgcccctcggccggcgcgtgctggagctc
gcctgtcggcaggcgcggcagtggcaggagtgtcatccgcacgccctgttcgtcagcgtc
aacctggccgcccggcagacccgcgaggccggcctggtggaacaggtccgacgcattctc
gacgagaccgggctttccccggacctgctccagctggaacttaccgagagcgccttcatg
ggcacggccgacgagccgctgcgggtcctgcgcgggctcgccgagatgggcgtgcggatc
gctatcgacgacttcggcaccggttattccaacctcgcctacctgcgtcggctgccggtg
cacacgctcaagctcgccggaccgttcgtcgagggcttccactcggcgcgggacgccgac
ccgggggatgaggagatcgtgcagacgctggtcacgttggcccacaccctgcgcctgacg
gtgaccgccgagggcgtcgagaccccgatgcaggccgagcggctgcgcgcggccgcctgc
gacagcgcgcagggctttctcttcgcgccgccgctgacggctgaggagatcacccagagg
atcctcacccggtccgctggctcggaccgaacatcttcgagccccacgcaggcagcgcgg
gcggcatgggcgcgctga
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