Frankia casuarinae: Francci3_1034
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Entry
Francci3_1034 CDS
T00320
Name
(GenBank) ABC transporter related
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fra02000
]
Francci3_1034
Transporters [BR:
fra02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Francci3_1034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
AAA_29
AAA_22
DUF87
APS_kinase
RsgA_GTPase
HUTI_composite_bact
AAA_15
AAA_16
TsaE
AAA_25
AAA_18
AAA_33
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
ABD10416
UniProt:
Q2JE76
LinkDB
All DBs
Position
1226618..1230583
Genome browser
AA seq
1321 aa
AA seq
DB search
MPSPRPRPQPAEEPAAPGPEKAEEAGPEKPAAGWLRRILREILVYRRNAALAFGAALLGT
LVTAAVPLVERQVIDNVVVTHRHSLAPYVAILLGAGVVVFAAAFVRRYVGGRLSLDVQYD
LRDAVFSAIERLDGARQDQLQTGQVVSRAISDVTVVQGLLSYLPMMSGNLVLFVVSLVVM
AWLSPLLTVIALALGPALFIVGYSARRTVFPATWAAQQQAGEVAGAVEEAVAGVRVVKGF
GQEARELDRLAVDARWLFALRMRAVRITSRFGAAMQAVPALGQVAVLALGGWLALTDRIT
LGTFLAFSTYLGALIGPTRTLAGLLTVGQQAKASTIRIFEIIDSQPAITDRPDAVRLGRI
RGLVDLDSVTFGYAPSRPVLRDVSLRIEPGETVALVGTSGSGKSTVAMLLPRFYDPQAGT
VRLDGVDIRTVTLSSLRAQIGVVFEDSFLFSDTVRANIAYGRPGATDDQIIAAARAAQAD
VFIRGLPDGYDTVVGEQGLTLSGGQRQRVALARALLTDPRVLLLDDATSAVDARIEAEIH
DTLRTIMRGRTTLLIAHRRSTLRLADRIAVLDAGRIVDVGTEAELTARCPLFRHLLAGPG
EGLPDQLSSPSPSPDPGLSCLSRGINQTQKALDRQGSRQGKGSRQGKRKGNVLRGGATRG
GLGRGLGGGGPFGDMPATPDLLARVDALPPALDEPRVDQAAAAAPDPAFSLHRLLAVVRW
PLILGLLLVAADAVAGLALPALVRHAVDAGVSVGARDVLFATAGVALAVVLVNWAVQVWQ
TRVTGRMGERLLYILRVKTFAQLQRLGLDYYERELAGRIMTRMTTDVDALSTFLQTGLTT
AIVSLLSFFGVLVALIVLDAELALVVVAVLPILIVVTVVFRRRSSAAYTESRERVSAVNA
SLQENLTGLRIAQAFGREAVNQARFRELADSYRRSRLRAQRMIALYFPFVEFLSRIAGAL
VLGIGAHLAVGGSLSPGALLAFLLYVDLFFAPVQQLSQVFDGYQQARVGLRRLSELLRTP
TSTPSAEYPRPVGRLAGEVVLDGVRFAYVGGTAARTENAGPAGNAGPAGNAVNGVSLRIA
PGETVALVGETGAGKSTVVKLIARFYDVTEGAVRVDGVDVRDFDLPAYRRRLGVVPQEPF
LFSGTVRDAIAYARPDASDAEVVAAARAVGAHAFITRLADGYDHLVGERGRGLSAGQRQL
LALARAELADPDILLFDEATAALDLATEAAVTAASEAVATRRTTIIVAHRLTTAARADRV
VVMADGRVVEQGPHAELVHAGGPYSRLWAAFTAESVTPAESVTPVDLSPTADSGADRRAA
G
NT seq
3966 nt
NT seq
+upstream
nt +downstream
nt
ttgcccagcccacgcccacggccccaaccagccgaggagcctgccgcgcccgggccggag
aaagccgaggaggccgggccggagaaaccggcggccggctggctgcgcaggattctccgc
gagatcctcgtgtaccgccgcaacgccgccttggccttcggcgccgcgctgctcggcacg
ctcgtcacggccgccgtcccgttggtcgagcggcaggtcatcgacaacgtcgtagtcacg
caccgccactctctcgcaccctacgtcgccattctgctcggggccggggtcgtcgtcttc
gccgccgcgttcgtccgacgctacgtcggtggtcggctctccctcgacgtccagtacgac
ctgcgcgacgccgtcttcagcgccatcgagcgcctcgacggggcccggcaggaccagctc
cagaccgggcaggtggtgagccgggcgatctcggacgtcaccgtggtccagggtctgctg
tcctacctgccgatgatgagcggcaacctggtgctcttcgtcgtgtcccttgtggtgatg
gcctggctgtccccgctgctcactgtcatcgcgctcgcgctggggccggcgctgttcatc
gtcggctacagcgcccgacgcacggtcttcccggcgacctgggcggcgcagcagcaggct
ggcgaggttgccggagcggtcgaagaggccgtcgccggcgtccgggtggtgaaggggttc
ggacaggaggcccgcgagctggaccggctggcggtggacgcccggtggctgttcgcgctt
cggatgcgtgcggtgcgcatcaccagcaggttcggtgcggcgatgcaggccgttcccgcg
ctcggccaggtcgcggtgctggcgctcggcggctggctggcgctgacggaccggatcacc
ctcggtaccttcctcgcgttcagcacctatctcggcgccctgatcgggccgacgcggacc
ctcgccggtctgctcaccgtgggccagcaggccaaggccagcacgatacgcatcttcgag
atcatcgattcgcagccggcgatcacggaccggccggacgccgtgcgccttggccggatc
cgcgggctggtcgacctggacagtgtcacgttcggctacgctccgtctcgccccgtgctg
cgggacgtgagcctgcggatcgaaccgggggagacggtcgccctcgtcggcacgtccggt
tcgggtaagtcgacggtcgcgatgctgctgccgcggttctacgacccccaggccgggacg
gtccgccttgacggtgtggacatccgcacggtgacactgtcgtcgctgcgggcgcagatc
ggggtcgtcttcgaggacagtttcctgttctccgacacggtgcgcgcgaacatcgcctac
ggccggccgggtgccacggacgaccagatcatcgcggccgcgcgggcggcgcaggcggac
gtcttcatccgcggcctgcccgacggctatgacaccgtcgtgggagaacagggcctgacc
ctctccggcggccagcgccagcgcgtcgcgctcgcccgcgcgctactcaccgatccccgc
gtcctgctcctcgacgacgcgacctcggccgtggacgcccggatcgaggccgagatccat
gacacgcttcggacgatcatgcgtggccgcaccactctgctcatcgcgcaccggcgctcc
accctgcgccttgccgaccggatcgccgtgctcgacgccggccggatcgtcgacgtcggg
accgaggccgaactgacggcccgatgtcctctgttccgccatctgctcgccggccccggc
gagggccttcccgaccagctctcgtccccgtccccgtctcccgaccccggcctttcttgc
ctgtccagagggataaatcagacgcaaaaggctctggataggcaaggaagtaggcaaggg
aaaggaagtaggcaagggaaaagaaagggaaatgttctccggggtggtgctacccggggt
ggtctcggccgggggctcggcggcgggggccccttcggtgacatgccggcgacccccgac
ctgctcgcccgggtcgacgccctgcccccggcgctcgacgagccgcgggtcgaccaggct
gcggcggccgcccccgacccggcattctcgctgcaccggctgctggccgtggtccgctgg
ccgctcatcctgggcctgctgctggtggcggcagacgccgtcgcgggtctcgccctgcca
gcgttggtgcggcatgccgtcgacgccggcgtgagcgtcggggcacgtgacgtcctgttc
gccaccgccggtgtcgcgctggcggtggtgctggtcaactgggcggtgcaggtgtggcag
acccgtgtcacgggccggatgggggagcggctgctctacatcctgcgggtgaagaccttt
gcgcagctgcagcgcctcgggctcgactactacgagcgcgagctcgccggccggatcatg
acccggatgacgaccgacgtcgacgccctgtcgaccttcctgcagaccggcctgaccacc
gccatcgtcagcctgctgtccttcttcggcgtcctggtggcgttgatcgtgctggacgcc
gagctcgccctggtcgtcgtcgccgtactgccgatcctgatcgtggtgacggtggtgttc
cggcgtcgctcctccgccgcctacaccgagtcccgggaacgggtcagcgccgtcaacgca
tcgctgcaggagaacctgaccgggctgcgcatcgcccaggcgttcggccgggaagcggtc
aaccaggcgaggttccgcgagctcgcggacagctaccgccgctcgcggctgcgggcacaa
cggatgatcgctctctacttcccgttcgtcgagttcctctcccggatcgcgggtgctctc
gtgctgggaatcggcgcccacctggccgtcggcggatccctgtcgccgggagcactactc
gcgttcctgctctacgtggacctcttcttcgcgccggtgcagcaactgtcccaggtgttc
gacggttatcagcaggcccgggtcggtctgcgccggctttccgagctgctgcggactccg
acctcgacgccgtcggccgagtacccgcgaccggtcggacggctggccggcgaggtggtc
ctggacggcgtccggttcgcctacgtgggaggcactgccgcgcggacggagaacgcgggg
ccggcgggaaacgcggggccggcgggaaacgccgtgaacggggtgagcctgcgcatcgcc
ccgggggagacagtcgccctggtcggggagaccggcgcgggcaagtccacggtggtgaag
ctgatcgcccggttctacgacgtgaccgagggcgcggtgcgggtggacggtgttgacgtg
cgcgacttcgacctgcccgcctaccggcgacggctcggcgtcgttccgcaggagccgttc
ttgttctccggcacggtccgggacgccatcgcctacgctcggccggatgcctccgacgcc
gaggtcgtggcggcggcgcgggcggtcggcgcccacgcgttcatcacccgcctggccgac
ggctacgatcatctggtcggcgaacgcggccggggactgtccgccggccagcgtcagctc
ctggcgctcgcccgcgcggagctcgccgacccggacatcctgctgttcgacgaggcgacc
gcggcgctcgacctcgcgacggaggctgcggtcacggcagcctcggaggcggtggccacc
cggcggaccacgatcatcgtcgcccatcggctcaccacggcggccagggccgaccgggtg
gtcgtgatggcggacggccgggtggtcgagcaggggccgcacgccgagctggtgcacgcc
ggcggcccgtattcccgcctgtgggccgccttcaccgcggagtcggtcacgcccgcggag
tccgtcacgcccgtggatctcagcccgaccgcggacagcggtgctgaccggcgagcggct
ggctga
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