Frankia casuarinae: Francci3_1165
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Entry
Francci3_1165 CDS
T00320
Name
(GenBank) hypothetical protein
KO
K16648
arabinofuranan 3-O-arabinosyltransferase [EC:2.4.2.-]
Organism
fra
Frankia casuarinae
Pathway
fra00572
Arabinogalactan biosynthesis - Mycobacterium
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00572 Arabinogalactan biosynthesis - Mycobacterium
Francci3_1165
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
fra01003
]
Francci3_1165
Glycosyltransferases [BR:
fra01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Francci3_1165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GT-C_AftD
F5_F8_type_C
CBM_AftD
Motif
Other DBs
NCBI-ProteinID:
ABD10544
UniProt:
Q2JDU8
LinkDB
All DBs
Position
1388110..1392078
Genome browser
AA seq
1322 aa
AA seq
DB search
MAAGFMVLFLLQAPGNLTADTKLDVPLDPWGFMGRATHLWNSLAEFGYLPNQYVGYLFPM
GPFFGAGDLLGIPAWVTQRLWIALLLTVSAWGVVRLAEALRLGVPRTRVLAGLAYTLSPM
FLGKIGATSVALAGAAMLPWITLPLILALRPDGAFGADTGTAATTSTTAVDDVDAADDPA
LDPGRRLSPRRAAALSGLAILGTGGINATVTLCVLLCPAAVLVFAGGTRRAWALRAWWVV
AVILASAWWLLALMVQGRYGLNFLAFTETAQTTTATTSVAEALRGATDWLAYVQLPRPWL
PAATEYVSRPVPIIGSAAVAAIGLWGLSRADLPARRFLLVTLAAGTVSVAAAYPGHPGSP
LAGVVRDLLGDQLGFLRNVYKFQPVVRLPIALGIAHALTVRPVSLTARVRRWTTRGASRR
HGRTADMIVTVAVNVPVVLTVAALVCGMTPALAGRALQPRPFARVPDYWVAAADWLAAHP
QDGRALVLPGSPFAEYEWGRPLDEPLQWLARTPWGVRGLIPLGGTGVTRLMDGIEHQLAT
GSAAGLAPALARAGIGQILLRNDLEQKNWDVPPSTDELHRALRSSGLTLTAAFGPQVPAR
ASAKERLVPELRNPTARVPALEVWTVPGGAKLVGSYPADTAVVVSGGPEATVQLAGQGLL
SSDRAAVLAADLAADRTDPSAAVASSTSPAAIKVAPGEVIGPTTAWVDTDTLTRRDSTFG
LVHDAASYLLGPTGTAVGKTGEPHQWAEADVAGHQTVAGYVGGMSVTASSYGYDLLAAPD
LAPPAAVDGFAATAWTAQRTKGTTSAGQWIQLDAGRRMTVPYLDVRLLSEGSWRPAVEAL
RVSSEAGSVVTEVRPVEDIQRLAVPAGPSRWYRITFARVGQETDDTLGAGIREITIPGVT
FRHYAQLPTDVARRFAAPDGGLVAFSMARERVDPAQPFGGSEELALSRRFEVPRDMTFTM
SGSASFIPPPRGTPPAGDTPLLVDCGQGPTLVVDGTRYPLRISGRDSDVTSVRPVRVSLC
TDGGTLRLSAGPHLLGVDQGATSILVDAIALVGSGAQVSAATPRATTVHEWTAEHRTVQI
GAGDRAFLAVRENANSSWTAKLNGVALTPLRLDGWQQGWIVPAGTGGTIVIDNAPGAEYR
RNLVVGLLLVVVLVVLAVLPARFRLRPRSDENGYPALLRPRRLGRLGRATVSPPVAGVGW
TVLAMLAVALVAGPVALAVPVFVLVGRRWPAAGGRCAAVAMIGAGIGVAAQPGSQPGSGQ
GAFGPLVQVFGALALAAVLAALAGRAWDRPAGSGAGAHFGARAGSDVGHRTRNPYTDSKG
LG
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atggccgccggctttatggtgctctttctgctccaggcccccggcaacctgaccgccgac
accaagctggacgtcccccttgacccgtggggcttcatggggcgggccacccacctgtgg
aactccctcgccgagttcggctacctgcccaaccagtacgtcggctacctgttcccgatg
ggaccgttcttcggtgccggtgacctgctcgggatacccgcctgggtcacccagcggctg
tggatcgcgctgctcctcaccgtctccgcctggggggtcgtgcggctggccgaggccctg
cggctcggcgtaccgcgcacccgggtgctggccggactcgcctacaccctgtccccgatg
ttcctcggcaagatcggggcgacttccgtggcgctcgcgggcgccgccatgctcccgtgg
atcaccctgccgctcatcctcgcgctgcgtccggacggcgccttcggcgccgacaccggt
acggccgccaccaccagtaccacggccgtcgatgatgtcgatgccgctgacgatcccgcc
ctggacccgggccggcggctgtccccgcgacgggcggctgccctgtccggactcgccatc
ctgggcaccggcggaatcaacgcgacggtcacgctgtgcgtcctgctctgtccggcggcg
gtccttgtgttcgccggcggcacccgccgggcctgggcgctgcgggcctggtgggtcgtc
gccgtcatcctcgcctcggcctggtggctgctggcgctgatggtgcagggccgctacggg
ctgaacttcctcgcgttcaccgagaccgcccagacgaccacggcgacgacgtcggtggcg
gaagccctgcgcggcgcgacggactggctggcgtatgtccagttacccaggccctggctg
ccggccgccaccgagtacgtgtcccggccggtgcctatcatcggatcggcagccgtggcg
gcgatcgggctgtgggggctgtcccgggccgatctgcccgcccgccggttcctgctggtg
acgttggccgccggcacggtctcggtggctgcggcctatccggggcatccgggcagcccg
ctggcgggcgtggtgcgggacctgctcggtgaccagctgggctttctgcgcaacgtctac
aagttccagccggtggtgcgcctgccgatagccctggggatcgcgcacgccctgacggtc
cgacctgtcagtctcaccgcccgtgtgcggagatggacgacccgcggggcttcccgccgg
cacggcaggaccgcggacatgatcgtgaccgtcgcggtgaacgtccccgtcgtgctgacc
gtggccgcgctggtctgcggcatgacgccagcgctcgccggcagggcgctgcagccccgg
ccgttcgcccgggtgcccgactactgggtggccgccgcggactggctggccgcccatccc
caggacggccgggcactggtgctgcccggctcgccgttcgccgagtacgagtggggccgg
ccgctcgacgagccgctgcagtggctggcccgcacgccgtggggggtccgcggcctgatc
ccgctcggtggcacgggcgtgacccggctgatggacggcatcgagcaccagctcgccacc
gggtccgccgcgggcctcgccccggcgctggcccgggccgggatcggccagatcctgctc
cgcaacgacctggaacagaagaactgggacgtccccccgtccaccgacgagctccaccgg
gcgttgcgttcctccggtctcaccctgaccgccgcgttcggcccgcaggtgccggcgcgc
gcctcggcgaaggagaggctcgtcccggagctgcgtaacccgaccgcgcgggtacccgcg
ctggaggtctggaccgtcccgggcggcgcgaagcttgtcggctcctacccggcggacacc
gccgtcgtcgtctccggcggccccgaggcgacggtgcagctcgccgggcagggcctgctg
agcagcgaccgggccgccgtgctcgccgcggacctcgccgcggatcgcaccgatccgtcc
gccgccgtggcgtcttcgacgagcccggcggcgatcaaggttgcgccgggggaggtgatc
ggcccgacgaccgcctgggtcgacacggacaccctgacccggcgcgacagcaccttcgga
ctcgtccacgacgccgcttcgtacctcctcgggcccaccggcaccgcggtcggcaagacg
ggggagccccaccagtgggccgaggccgacgtcgccggccaccagacggtcgcgggctac
gtcggcggcatgtccgtcaccgcgtcctcctacggctacgacctactcgccgcgccggac
ctcgcgccaccggcggccgtcgacggcttcgccgcgaccgcgtggacggcacagcgcacg
aagggcacgacgtcggccgggcagtggatccagctcgatgccggccggcggatgaccgtg
ccctacctcgacgtgcggctgctgtccgagggttcgtggcggccggccgtcgaggcgctg
cgggtgtccagcgaggcgggctcggtggtcaccgaggtgcgtccggtggaggacatccag
cgcctcgccgtcccagcggggccgagccgctggtaccgcatcacgttcgcgcgggtcggc
caggagaccgacgacaccctcggcgccggtattcgggagatcaccatccccggggtcacc
ttccgccactacgcgcagctccccaccgacgtggcccggcgcttcgccgcgccggacggg
gggctggtcgccttctcgatggcccgggagcgggtcgacccggcgcagccgttcggcggc
tcggaggagctggcgctgtcccggcgcttcgaggtgccccgggacatgaccttcacgatg
agcggctcggcgagcttcatccccccgccgcgggggacacccccagcgggtgacactccg
ttgctggtcgactgcggccagggccccaccctggtcgtcgacgggacccgttaccccctg
cggatctccggccgggacagcgacgtcacctcggtgcggccggtgcgggtgtcgctgtgc
accgacggcggcacgctgcggctctcggcggggccgcacctgctcggcgtcgaccaggga
gcgacctccatcctcgtcgacgcgatcgcgctggtcggatcgggcgcccaggtgagcgcg
gccacgccgcgggcgacgacggtgcacgagtggacagcggagcaccggacggtccagatc
ggcgccggtgaccgcgccttcctcgccgtccgggagaacgccaactcctcgtggacggcg
aagctgaacggcgtggcgttgaccccgctgcgcctcgacggctggcagcagggctggatc
gtcccggccggcaccggcggcacgatcgtcatcgacaacgcgcccggtgcggaataccgc
cgcaacctcgtggtggggctgttgctggtcgtggtgctggtcgtgctcgccgtgctgccc
gcccggttccggctacggccacgatccgacgagaacggctatccggcgctgctgaggccg
cgccggctgggccggctgggccgggcgacggtgtccccgccggtggccggtgtggggtgg
acggtgctcgccatgctggcggtggcgctggtggcgggcccggtggcgctggccgtaccg
gtgttcgtcctggtcggtcggcgctggcccgcggcggggggccgctgcgccgcggtcgcc
atgattggcgcgggaatcggggtggcggcgcagcccggcagccagcccggatccgggcag
ggggcgttcgggccgctggtccaggtgttcggcgccttggccttggcggcggtgctggcc
gcgttggccgggcgggcctgggaccgtcccgccggctcgggcgccggcgcccacttcggc
gcccgagccgggtccgatgtcgggcataggactcgcaatccctataccgacagcaaggga
ctcggttag
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