Frankia casuarinae: Francci3_1226
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Entry
Francci3_1226 CDS
T00320
Name
(GenBank) Exodeoxyribonuclease I subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_1226
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Francci3_1226
Archaeal homologous recombinant proteins
Francci3_1226
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Hydrolase
Motif
Other DBs
NCBI-ProteinID:
ABD10604
UniProt:
Q2JDN8
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All DBs
Position
complement(1467635..1468891)
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AA seq
418 aa
AA seq
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MITGTARKARSSDPHDDHLDGIAYRARMRALHTSDWHLGRGLYGHDLMPAQAAFVDHLVD
VVRSEGVDVVLIAGDVHDRAIPPVGALELFDEALSRLRDAGARVVVISGNHDAARRLGDK
AGLLDPRVRIRTDPAAVGDPVVVEDPAGAVRVYAIPYLEPSAANSQLPEPAQAPSGSDVP
AAGIPAATMHRAMHAVRADLARYPDARSVVVAHAWVTGGAASESERDISVGGVGNVPARL
FEGITYTALGHLHRPQAIAPSVRYSGSPLAYSFSESGDAKASLLVEIGPTGLGNVTRIGV
PARRRMTLLRGSLADLLTDPAHAPHEADFVSAVLTDPVRPMDAMARLQHRFPFALRLAHE
PETEPDEILSFGRRTRGRSELEIAEAFVAHVRSAPSARERALLAEALGAARRAEEEVA
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
gtgataaccggaacagccagaaaggcgcgcagttcggacccccatgacgatcatctcgac
gggattgcctaccgtgctcgcatgcgtgcgctgcacacgtccgactggcatctcgggcgt
ggcctgtacggtcacgacctgatgccggcccaggcggccttcgtcgatcatctcgtcgac
gtcgtccgttccgagggcgttgacgtcgtgctcatcgccggcgacgtgcacgatcgggcg
atcccgccggtgggcgcgctggagctcttcgacgaggcgctctcccgactgcgcgatgcc
ggcgcccgggtcgtggtgatcagtggcaaccacgacgcggcccgccggctcggcgacaag
gccggcctgctcgacccccgcgtccgcatccggacggatccggccgcggtcggggatccg
gtcgtcgtcgaggatcccgccggggcggtccgggtgtacgcgatcccctacctggagccg
tcggcggcgaactcccagcttcccgaaccggcgcaggcgccatctggctcggacgtcccg
gccgccgggatccccgccgcgacgatgcaccgggcgatgcacgcggtgcgggccgacctc
gcacggtatccggatgcccggtccgtcgtggtggcgcacgcctgggtcaccggcggggcg
gcgagcgagagcgaacgcgacatcagcgtcggcggggtgggcaatgtgccggcccggttg
ttcgaggggatcacctataccgcgctcggccatctgcaccggccacaggcgatcgccccg
tccgtccgctacagcggatcgccactggcctactccttctcggagtccggcgacgcgaaa
gcgtcgctgctcgtcgagatcggtccgaccgggctggggaacgtgacccgcatcggcgtt
cccgcccggcggcggatgaccctgctgcgcggcagtcttgccgacctcctcaccgacccc
gcccatgccccgcacgaggccgacttcgtctccgccgtgctgaccgaccccgtccgcccc
atggacgccatggcccggttgcagcaccggttccccttcgccctacgactcgcgcacgaa
ccggagacggaaccagacgagatactcagcttcggccggcggacccggggacgctcggag
ctggagatcgccgaggccttcgtcgcccatgtacgcagcgctccctcggctcgggaacgt
gctctgctcgccgaagccctcggcgccgcccgccgggccgaggaggaagtcgcctga
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