Frankia casuarinae: Francci3_1272
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Entry
Francci3_1272 CDS
T00320
Name
(GenBank) DNA replication and repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
fra
Frankia casuarinae
Pathway
fra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Francci3_1272
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_1272
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Francci3_1272
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Francci3_1272
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_C
RecO_N
Anti-TRAP
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
ABD10650
UniProt:
Q2JDJ2
LinkDB
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Position
1517948..1518817
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AA seq
289 aa
AA seq
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MYCHTYPPAMDRDVLRVPQENIRPVPAICRATSLHRMNSGPCNHGRVPVYRDEGVVLRTA
PLAEADRIITVLTRRTGRVRAVAKGVRKTSSRFGSRLEPGTYVDLLLHSGRALDTVTQAD
IISPYGATIAVDYPRYTAAAVMLETAERLTSEERQPALRLFLLLVGGLRTLAGDERPPAL
VLDAFLLRALAVSGYGMALDHCARCGGPGLHLSLSVPGGGVVCPQCRPHGAASVSAGAVR
LLADLLRGDWDGALVSDARARREAGGIAAAYLQWHLERGLRALPYLERA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtactgccatacctaccccccggctatggaccgggatgtcctgcgggttcctcaggag
aacatccggccggtaccggccatctgccgggcgacctcgcttcaccgcatgaactcggga
ccgtgcaaccatgggcgggtgccggtgtatcgcgacgaaggtgtcgtcctacgcacggcc
cccctcgccgaggccgaccgcatcatcaccgtgctcacccgtcggaccggtcgggtgcgg
gccgtcgccaagggtgtccgcaagacgtcctcgcggttcgggtcgcggctggagccgggc
acgtacgtcgatctgctgctgcattccggccgggcgctggacacggtcacccaggcggac
atcatctctccctacggcgccacgatcgccgttgactacccgaggtacactgcggccgcg
gtgatgctcgagaccgccgagcggttgaccagcgaggaacgccagcccgccctgcggctg
ttcctcctgctcgtgggtggtctgcgtacgctcgccggcgacgagcgcccacccgcgctc
gtcctcgacgcgttcctgttgcgggcgctcgcggtgtccgggtatgggatggccctggac
cactgcgcgcgttgcggtgggcccgggctgcacctgtcgttgtccgtgccgggcggcggc
gtagtgtgcccgcaatgtcgcccgcacggtgcggcgtcggtgtccgcgggtgcggtgcgg
ctgctcgcggatctgttgcgcggtgactgggacggtgcactggtcagtgacgcccgcgcc
cggcgggaggccggtggcatcgccgccgcctatctccagtggcatctcgaacgcgggctt
cgcgcactgccttatctggagagggcgtga
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