Frankia casuarinae: Francci3_1275
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Entry
Francci3_1275 CDS
T00320
Name
(GenBank) glycyl-tRNA synthetase beta chain
KO
K14164
glycyl-tRNA synthetase [EC:
6.1.1.14
]
Organism
fra
Frankia casuarinae
Pathway
fra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Francci3_1275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fra03016
]
Francci3_1275
Enzymes [BR:
fra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.14 glycine---tRNA ligase
Francci3_1275
Transfer RNA biogenesis [BR:
fra03016
]
Prokaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Francci3_1275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_synt_2f
tRNA-synt_2e
DALR_1
Motif
Other DBs
NCBI-ProteinID:
ABD10653
UniProt:
Q2JDI9
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All DBs
Position
1520749..1523802
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AA seq
1017 aa
AA seq
DB search
MLTMQDALLALTRYWTDRGCMIVQPFNTEVGAGTLNPATVLRVLGPEPWRVAYVEPSVRP
DDSRYGHNPNRLQTHTQFQVILKPDPGNPQELYLGSLAALGIDTAAHDVRFVEDNWASPA
FGAWGLGWEVWLDGLEITQFTYFQQAGGQTLDTVSVEITYGVERILMALQGVRHFSEIAY
APGISYGEVFGQAEYEMSRYYLDDADIDTVRRLYADYAAEARRLIDARLPVPAHSYVLKC
SHAFNILDSRGAVSTTERATSFAQMRGLSREVATLWRDRREELGHPLGAASPPPAAVPAA
VTTRAEEPATLLFEIGTEELPAAEVTRTVEAVRAGLVERLAATRLTHGAVRVLGTPRRIV
AIVDEVAPREPDVERVVRGPRVSAAYDAAGAPTKAAVGFARGQGADPAGLQVVTHRGVEH
VALVRTEAGRDAARVLAGVLGELVVGLRAERNMRWNDPTLSFSRPVRWLLALLGETVVPV
TVSTLAAGRTTRGHRRAGSPPLDVPSASGYPELLAARSILLDPVVRRELVVEEAAKLTAD
SGGHIDLVAEADVLTEVANLVEFPCPILGSFEERFLDLPAEILTTVMRKHQRYLPVRDAA
GRLLPSFVAVADGKVDQALVRAGNEDVIRARFTDAAFFYDADITVPLETFRAELAKLTFE
QRLGSVADRADRIAALARDLAEEIDLGEDDRATLDRAAALAKFDLATQMVIELSSLAGTM
AREYARRAGEPEAVAVALFEMELPRRAGDQLPDTAPGGLLALADRLDLLVGLFALDAAPT
GSSDPFGLRRAALGVAAILGSRPELAGLTVTGALARAARLTPVPVSAEALEAAETFVRGR
YVQQLLDTGVDHRLVGAVGPLTGTPARAAATLVTLRQLVQGESAPAAGFAALAAALQRVR
RIVPAGTPAVLDAQRLTEPAEIDLLEVVTALVRRLASSGADSAVTAETAAGAISLDELVV
AAGDLPAAVDAFFDAVMVMADDPAVRAARLGLLAWIRDLTTGALDWEALGSLSASGR
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccatgcaggacgcgctgctggcgctgacccgttactggaccgaccgcggctgc
atgatcgtacagccgttcaacaccgaggtcggcgccggtacgctcaacccagccacggtg
ctgcgggtgctcggaccggagccgtggcgggtcgcgtacgtcgaaccttcggtccgtccc
gacgactcccgctacggccacaacccgaaccggctgcagacccacacccagttccaggtc
atcctcaaaccggatccgggtaacccccaggagctctacctgggtagcctcgcggcgctc
ggcatcgacaccgccgcccacgatgtccggttcgtcgaggacaactgggcctcgcccgcg
ttcggtgcctgggggctgggctgggaggtctggctcgacggcctggagatcacccagttc
acctacttccagcaggccggtggccagacgctcgacaccgtcagcgtcgagatcacctat
ggcgtggaacgcatcctcatggccctgcagggcgtccgccacttcagcgagatcgcttac
gcccccggcatctcctacggcgaggtgttcggccaggccgagtacgagatgtcccggtac
tacctcgacgacgccgacatcgacaccgtgcgccggctctacgccgactacgccgccgag
gcccgccggctcatcgacgcccggctgcccgtccccgcgcactcctacgtgctgaagtgc
tcgcacgccttcaacatcctcgactcccggggcgcggtctctaccaccgagcgggccacc
tccttcgcgcagatgcgtggactgtcgcgggaggtcgcgacgctgtggcgggaccgtcgc
gaggagctcggccatcccctcggggcggcttccccgccaccggccgcggtgcccgccgcg
gtgaccacccgggccgaggagccggccaccctgctgttcgagatcgggacggaggagctc
ccggcggccgaggtgacccggaccgtcgaggcggtgcgcgccggcctcgttgagcggctg
gcggccacccgcctcacgcacggtgcggtccgggtgctgggcactccccggcgcatcgtg
gcgatcgttgacgaggtggcgccccgggagccggacgtcgagcgggtcgtccgcggcccg
cgcgtctcggccgcctacgacgccgccggcgcgccgacgaaggccgccgtcgggttcgcg
cgtggtcagggtgcggatcccgccggcctccaggtcgtcacccaccgcggtgtcgagcat
gtcgcgctcgtgcgcaccgaggccggccgggacgccgcccgggtgctggccggggtgctc
ggtgagctggtggtggggctgcgcgcggagcgcaacatgcgctggaacgatccgaccttg
tcgttcagccggccggtgcgctggctgctcgccctgctcggcgagaccgtggtgccggtg
acggtgtcgacgctcgcggccggtcggaccacccgcggccaccggcgggccggctccccg
ccgctggacgtgccgagcgcgtccggctacccagaactgctcgctgcccggtcgatcctg
ctcgacccggtggttcgccgcgagctcgtcgtcgaggaggcggccaagctcaccgcggac
tccggcggtcacatcgacctcgtcgccgaggcggacgtgctcaccgaggtggcgaacctc
gtcgagttcccgtgcccgatcctcgggtccttcgaggaacgctttctggacctgccggcg
gagatcctcaccaccgtcatgcgcaagcaccagcgctacctgccggtgcgtgacgccgcc
gggcggctgctgccgtcgttcgtagccgtcgccgatggtaaggtcgaccaagcgctggtc
cgcgccggcaacgaggacgtcatccgggcccggttcaccgacgccgcgttcttctacgac
gccgacatcacggtgccactcgagacgttccgggcggagctcgcgaagctgacgttcgag
cagcggctcggctccgtcgcggaccgggccgaccgcatcgcggcgctggcgcgtgacctc
gccgaggagatcgacctcggtgaggacgaccgggccaccctggaccgggcggccgcgctc
gccaagttcgatctggccacccagatggtcatcgagctgtcgagcctcgccggcacgatg
gcgcgggagtatgcccgccgggccggtgagcccgaggcggtcgccgtcgccctctttgag
atggagctgccccgccgggccggtgaccagctgcccgataccgcccccggtggcctgctg
gccctcgccgaccggctcgatctgcttgtcgggctgttcgcgctcgacgcggcccccacg
gggagttcggatccgttcgggttgcgccgggccgcgctcggggtcgccgcgatcctgggc
agccggcctgagctcgccggcctcaccgtcaccggcgcgctggcccgcgccgcccggctc
accccggtgccggtgtccgccgaggcgctcgaggccgccgagacgtttgtccgtggccgc
tacgtccagcaactactcgataccggagtggaccaccgcctggtcggcgcggtcgggccg
ctcaccggcacgccggcccgcgcggccgccaccttggtgacactgcggcagctcgtccag
ggggagtccgcacccgccgccggcttcgccgccctggccgccgcgttgcagcgggtccgc
cggatcgtgccggccgggaccccggcggtgctcgacgcgcagcgcctcaccgaacccgcc
gagatcgacctgctggaggtcgtgacggcgctcgtccggcggctcgcgtcctccggcgcc
gattcggctgtcaccgcggagacggcggccggagcgatctcccttgatgagctggtcgtc
gcagccggagacctgccggccgccgtcgacgcgttcttcgacgcggtgatggtgatggcc
gacgacccggcggtgcgggcggcgcggctcggtctgctggcctggatccgggacctgacg
accggagctctcgactgggaggctctcggctcgctgtccgcctccggtcgctga
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