Frankia casuarinae: Francci3_1932
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Entry
Francci3_1932 CDS
T00320
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
fra
Frankia casuarinae
Pathway
fra00061
Fatty acid biosynthesis
fra00071
Fatty acid degradation
fra01100
Metabolic pathways
fra01212
Fatty acid metabolism
fra02024
Quorum sensing
fra04146
Peroxisome
Module
fra_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Francci3_1932
00071 Fatty acid degradation
Francci3_1932
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Francci3_1932
09145 Cellular community - prokaryotes
02024 Quorum sensing
Francci3_1932
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
fra01004
]
Francci3_1932
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fra04147
]
Francci3_1932
Enzymes [BR:
fra01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Francci3_1932
Lipid biosynthesis proteins [BR:
fra01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Francci3_1932
Exosome [BR:
fra04147
]
Exosomal proteins
Exosomal proteins of breast milk
Francci3_1932
Exosomal proteins of breast cancer cells
Francci3_1932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ABD11307
UniProt:
Q2JBN5
LinkDB
All DBs
Position
2271821..2273593
Genome browser
AA seq
590 aa
AA seq
DB search
MNILRVPGGTELPADRGLAAAVLTEVAMVADRPVLAHQVDGGWRDVTAGRFCFDVAAVAR
GLVAHDVGVGDRVAIMGRTGYGWAVADFAIWSIGAVTVPVYPTSSAHQVDHIIGDSKASW
CFVETPDHERLVLSAGLPATRVWSLDEAVSALGTAGQSVAESEVLRRRDAVRADDLATIV
YTSGTTGVPKGCLLTHANVFSAAVNSVERLDPVMRPATGSASTILFLPLSHVFGRVTMIG
CLWAGVRTALLPDPGGLVPALRTFRPTFLITVPSALEKMRKGARAAAAGGLSGRLFAAAE
RTACVLGRARRGQGGLGLVTRLQAPLFDRLVYRRLRAAFGGRLRHVVCGGATLDPSTAEF
LTGVGVHVLGAYGLTEASTAVSISAPGLDRPGSTGRPLPATTVAISDEGEVLVAGPQVSP
GYWPDRTGAHEPWLRTGDLGRLDDDGYLHITGRIKEIIITTGGKNVSPAPLEDRIRLHPL
VSNAIVIGENRPFVTALVTLDRAAVQAWARRGGHKLDEAAAHTDPRLVAEVSAAVDAANA
QVSRAESVRKFRLLSHDFTIQGGQLTPSLKLRRAVIEEENAKEIEELYAS
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
gtgaacattctgcgggtgcccggaggtactgagctgcccgccgaccgagggctggccgcc
gccgtccttactgaggtcgccatggtcgccgaccggccggttctggcccatcaggtggac
ggaggctggcgcgatgtgaccgcgggccggttctgcttcgacgtcgcggccgtcgccagg
ggcctggtggcgcacgacgtcggggttggcgaccgggttgcgatcatgggtcggaccggt
tacggctgggccgttgccgacttcgcgatctggagcatcggcgcggtcaccgtccccgtc
tacccgacctcctcggcccaccaggtcgaccacatcatcggtgactccaaggcctcgtgg
tgcttcgtcgagacacccgaccacgagcgcctggtcctgtcagcgggtcttcccgcgacg
cgcgtctggtcgctggacgaggccgtgtcggcactcggcaccgccggtcagtccgtcgcg
gagtccgaggtgctccgccgccgggacgcggtccgggccgacgacctcgcgacaatcgtc
tacaccagcgggacgaccggcgtgccgaagggctgcctgctgacccacgcgaacgtcttc
tccgccgccgtcaactcggtggagcggctggacccggtgatgcgtccggccaccggctcg
gccagtaccattcttttccttccgctctcgcacgtgttcgggcgtgtgaccatgatcggg
tgtctgtgggccggagtgcggacggccctgctgccggaccccgggggcctcgtcccggcg
ctgcgcaccttccgccccaccttcctgatcaccgttccgtcggcgctggagaagatgcgc
aagggcgcgcgggcggcggcggcgggcggactctcggggcgcctgttcgccgcggccgaa
cggaccgcctgcgtgctgggtcgggcccggcgtgggcagggcggcctggggctcgtcacg
cggcttcaggctccgctgttcgaccggctggtgtaccgccggttgcgcgcggcgttcggc
gggcgcctgcgccacgtcgtgtgcgggggagcgacgctcgacccctccaccgccgagttc
ctcaccggggtcggggtgcacgtcctcggcgcctacgggctgaccgaggcctcgacggcc
gtcagcatcagcgctcccgggctcgaccggccgggcagcacgggccgtccgctgccggcg
accaccgtcgcgatcagcgacgagggcgaggtcctggtggctgggccgcaggtctcgccg
ggctactggccggatcggacgggcgcgcacgagccgtggttgcgcaccggtgacctcggt
cggctcgacgacgacgggtatctccacatcaccggtcgaatcaaggagatcattatcacc
accggggggaagaacgtctcgccggcaccgctggaggaccgcatccggctgcacccgctg
gtcagcaacgccatagtgatcggggagaaccggccgttcgtgacggccctcgtgaccctc
gatcgggccgccgtgcaggcctgggcccggcgaggcggtcacaagctggacgaggccgcc
gcccacaccgaccctcggctggtcgccgaggtcagcgccgcggtcgacgcggcgaacgcg
caggtctcgcgggccgagtcggtgcggaagttccgcctcctgagccacgacttcaccatc
cagggcggccagctcaccccgtcgttgaagcttcgccgtgccgtgatcgaggaggagaac
gccaaggagatcgaggagctgtacgcgtcctga
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