Frankia casuarinae: Francci3_2118
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Entry
Francci3_2118 CDS
T00320
Name
(GenBank) Oligopeptide/dipeptide ABC transporter, ATP-binding protein-like
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
fra
Frankia casuarinae
Pathway
fra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Francci3_2118
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fra02000
]
Francci3_2118
Transporters [BR:
fra02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Francci3_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
AAA_29
nSTAND1
AAA_19
Mg_chelatase
nSTAND3
NACHT
NB-ARC
Zeta_toxin
DO-GTPase2
Motif
Other DBs
NCBI-ProteinID:
ABD11490
UniProt:
Q2JB52
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Position
2484319..2486136
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AA seq
605 aa
AA seq
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MSPDVTAAEPTLVVERLDVTFRDGVAGVRAVRDVSIAVRPGECLAVVGESGAGKSVLART
LIGLAGRGAMVRAGRLDLQGVDLTALTEPGWRVLRGRRIGLVPQDALASLDPLRTVGAEV
AEPLRVHRIVARRDVRERAVATLGQVGVPEPARRAGQYPHQLSGGLRQRALIASTVAAGP
DLLLVDEPTTALDAASRERIVEVLRGLVRGGVALLLISHDLATVAAVADRVAVMYEGRII
EQGPAVDVLGGPRHPYTCALLAAAPSRHSRGTVLSPDLPRRPPAGPDGCPYAVRCPLADH
WCREELPRPDHPGLEPGVLCWRPGTETERAGPPRVVAPARRDTAEALVEATGITKRFRDP
DGGWRDAVRAVTFELRAAETLGVIGGSGSGKTTLARIVLGLLEPDEGTVRFAGAPWVAAA
AATASPSRVRERDRRPRRHRIQAVHQDCLSSFDPRHTAERIVGDAMSGPDRGRARRDRIV
ALLDQVGLSEQVLRRHPRELSGGQRQRLAIARALAPSPEVLVCDEPVSALDLSVQAQILD
LLAGLRDELGLALLFISHDIAVIRHVSDRVLVMKDGQVAEIGGAEQVLERPAHPYTRHLL
AAART
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgagcccggacgtgaccgccgccgagccgaccctggtcgtcgagcggctggacgtgacg
tttcgggacggcgtcgccggcgtgcgtgcggtgcgggacgtgtcgatcgccgtccgtccc
ggcgagtgtctcgcggtcgtgggcgagtccggtgccggcaagagcgtgctcgcccggacg
ctgatcggactggccgggcgcggtgcgatggtccgtgctggccggctggacctgcagggc
gtggatctgaccgccttgaccgaaccggggtggcgggtgttgcgaggccgccggatcggg
ttggtgccccaggacgcgttggcctccctggatccgctgcggacggtgggagcggaggtg
gccgagcccctgcgcgtccaccggatcgtggcccgtcgcgacgtccgcgagcgggccgtc
gcgacgcttgggcaggtgggggtgccggagccggcccggcgcgccgggcagtacccgcat
cagctctctggcggtctgcgacagcgggccctgatcgcctcgacggtcgcggccggaccc
gacctgctgctggtcgacgaacccacgaccgcgttggatgccgcctcccgggagcggatc
gtcgaggtgctgcgcggcctggtacgcggcggtgtcgctctgctgttgattagtcacgat
cttgccacggtggccgccgtcgccgaccgggtggcggtcatgtacgaggggcggatcatc
gagcagggaccggccgtcgacgtgcttggcggtccacggcatccgtacacctgcgcgttg
ctcgcggcggccccctcgcggcactcgcggggcaccgtgctgtccccggacctgccgcgc
cgtccaccggccgggccggacggctgcccatacgcggtgcgctgcccactcgccgaccac
tggtgccgcgaggaactgccgcgccccgatcacccgggtctcgaacccggcgtcctgtgc
tggcggcccggaacggaaacggagcgggccggaccgccacgggtcgtcgccccggcccgc
agggacaccgccgaggctctcgtcgaagccaccggcatcaccaaacgtttccgcgatccc
gacggggggtggcgggacgccgtccgtgccgtgacgttcgagcttcgtgccgccgagaca
ctcggcgtcatcggtgggtccgggtccggcaagaccacgctggcccgcatcgtgctcggc
ctgctcgaaccggacgagggtaccgtccggttcgccggcgcgccctgggtggcggccgcg
gcggcgaccgcctcgcccagccgggtacgcgaacgtgaccgcaggcctcggcggcaccgg
atacaggccgtccaccaggactgcctgagctcattcgacccgcgtcacaccgccgagcgg
atcgtcggcgacgccatgtccggtccggatcggggccgggcgcgacgagatcggatcgtc
gcactcctcgaccaggtagggctgtccgaacaggtgctgcgacgccaccctcgcgagctg
tccggcgggcagcgtcagcggctggcgatcgcgcgtgcgctcgcgccgtcacccgaggtc
ctcgtctgcgacgaaccggtgtccgcgctcgacctgtcggtgcaggcccagatcctcgac
ctgctggcgggactgcgcgacgaactcggcttggccctgctgttcatctcccacgatatc
gcagtgatccggcacgtcagcgaccgcgtcctggtgatgaaggacgggcaggtggccgag
atcggcggcgcggagcaggtgctcgagcgccccgcgcacccgtacacccggcatctgctg
gccgcggcccgcacctga
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