Frankia casuarinae: Francci3_2767
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Entry
Francci3_2767 CDS
T00320
Name
(GenBank) extracellular solute-binding protein, family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
fra
Frankia casuarinae
Pathway
fra02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Francci3_2767
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fra02000
]
Francci3_2767
Transporters [BR:
fra02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
Francci3_2767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Rhv_5
ATP-synt_J
Motif
Other DBs
NCBI-ProteinID:
ABD12127
UniProt:
Q2J9B5
LinkDB
All DBs
Position
complement(3261053..3262720)
Genome browser
AA seq
555 aa
AA seq
DB search
MKRPRPRFHPAVRVAAVAAAAAMLGACASDPAPAGSTSANGAGGTPHRGGTLTFAVATEG
DCLDPHVSPADVTAVIQRGVFDSLVTQQPGGGVGPWLATSWTVSADAKTFTFKLKDGVTF
HDGTPFDAAAVKANFDHIAAKSTKSQYAVALLGPYVGTEVVDPHTAKVTFSKPYAAFLAA
AATTYLGIESSKKIADAPDTLCSGGPNSVGTGPFRFTRYVKGSVAEFTRNDGYTSAPGGA
KHTGAAYLDKLAIRFLPEDATRVSALRSGEIDAADGVPAQNVAAIEGDTSLRLLKVIPQN
ANYSIYFNTRRAPFSDERVRKAVQRAVDVDTIVKTVYAGQYARAWSTLTPKNIAYDRSLE
KAFPHDVTAANKLLDEAGYTGRDADGYRTKNGARLVLDWPYVGAFNREQRDIVSQAVQAD
LKKVGIATKLYSMDSGAYTTQRNAGGYDLIAYSWGKSDPDLLRTLFASNLAFTQGGANSS
GIAVPEVDDWLATGAGTTDLAARKKAYGQVQKYVIDHAYTLPIYVFTRTVGTASKVHDIT
FDADAFPLFYDSWVG
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgcccacgtccccgattccaccccgccgtccgcgtcgcggccgtcgcggccgcc
gccgccatgctcggcgcctgcgcgtccgatccggcacccgccggctccaccagcgcgaac
ggggcgggcggaacaccgcaccggggcggcacgctcaccttcgcggtggccaccgagggc
gactgcctcgacccgcacgtcagcccggccgacgtcaccgccgtcatccagcggggtgtg
ttcgactcgctcgtgacgcagcagccgggcggcggggtcggcccgtggctggccacgtcg
tggacggtctcagccgacgcgaagacgttcaccttcaagctcaaggacggcgtgacgttc
cacgacggcacaccgttcgacgcggcggcggtgaaggcgaacttcgaccacatcgcggcg
aagtcaacgaagtcgcagtacgcggtggcgctgctcggcccctacgtcggcaccgaggtc
gtcgacccgcacacggccaaggtcaccttctccaagccgtacgcggcattcctcgccgcg
gccgccacgacctacctcggcatcgagtcgtcgaagaagatcgccgacgcgccggacacc
ctctgctcgggcgggccgaactcggtgggtaccgggccgtttcgcttcacccgttatgtg
aagggatcggtcgccgagttcacccgcaacgacggctacacctcggcccccggcggcgcg
aagcacaccggcgccgcctacctcgacaagctggccatccgcttcctgcccgaggacgcg
acgagggtgagcgcgctgcgcagtggggagatcgacgccgccgacggcgtgccggcgcag
aacgtcgccgcgatcgagggcgatacctccctgcggctactcaaggtgattccgcagaac
gccaactactcgatctacttcaacaccaggcgtgcgccgttctccgacgagcgggtccgt
aaggccgtccagcgcgccgtcgacgtcgacacgatcgtgaagacggtctacgccggccag
tacgcccgcgcgtggagcacgctgacgccaaagaacatcgcctacgatcgcagcctcgag
aaggccttcccccatgacgtcaccgcggcgaacaagctactcgacgaggccggctacacc
ggccgcgacgccgacggctaccgcacgaagaacggcgcgcgtctcgtcctcgactggccc
tacgtcggcgccttcaaccgcgagcagcgcgacatcgtcagccaggcggtacaggccgac
ctgaagaaggtcggcatcgccaccaagctctactcgatggactcgggcgcctacaccacc
cagcgcaacgccggcggctacgacctgatcgcctacagctggggcaagtccgaccccgac
ctgctccgtacactgttcgcctcgaatctggcgttcacccagggcggggcgaacagttcc
gggatcgcggtgccggaggtcgacgactggctcgcgaccggcgccggcacgacggatctc
gccgcccgcaagaaggcctacgggcaggtgcagaaatatgtgatcgaccacgcgtacacc
ctgccgatctacgtgttcacccggaccgtcggcacggcgtcgaaggtccacgacatcacc
ttcgacgcggacgccttcccgctgttctacgacagctgggtgggctga
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