Frankia casuarinae: Francci3_3038
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Entry
Francci3_3038 CDS
T00320
Name
(GenBank) transcriptional regulator, LuxR family
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_16
GerE
AAA_22
HTH_23
HTH_10
BrxC_BrxD
HTH_28
NACHT
HTH_30
TPR_12
Sigma70_r4_2
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
ABD12395
RhizoBase:
Francci3_3038
UniProt:
Q2J8J7
LinkDB
All DBs
Position
complement(3605027..3607879)
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AA seq
950 aa
AA seq
DB search
MPPRARSPERRASGTRTGGPWSWTPGLPPSSRVVARHEARTGPAPPASVKTTYIGAHTVP
VVGTPVRTFVGRGEERRRLEVLVAGAKNGEGGVLVLRGEAGIGKSALLDHLRRSAQGMRV
IEATGSQFETELPFAALHQLCVPALGDLAALPPPHRAALEAAFGLADGTPEMFRIGMAAL
ELLVTAAGSEPVLCLVDEAHWLDDASTRILTFLARRISAEPVAMVLAARHGLDELPSVEV
TGLADDDARRLLVDTRATLDETVRDRVLAEARGNPLALLELPGAGGFALPDASSVPSRVE
RSFQDRLVPLPEDVRLLLTVASADPTGDPGLLWAAAERLGVGPAAGAHAEASGLVELGPR
VRFCHPLARSAVYQAAAVEDRHAAHQALTEVTDPERDPDRRAWHRAQAGAGPDEDTAAEL
NRCATRAAARGGVAAAAAFLARAAALSRDPARRTERTLAAAQAHLDSGALDAADGLLTAV
TVDGTDPVALARVELMRGRITFVRRRDGDGPAFMLRAAQRLAATDPRWSRDCFLDAVEMA
LVVGRASGVMDMVVEAARSAPPASGPPDLLDALLRLATEGHHAAARPVREILASRPQWTR
RPALAGMLAVELWDAEAHGVITDWVLASARESGSPLTLRLGLGMAAAGAVHTGDFAAATS
AIAEEEAVADAVGVEPLAYPQLHLAALRGREAQARAVIDSFTAEATASGTGQTIANADWA
TAVLSNGLTDYPAALAAAEAATRHGDLFVAAIALPELVEAAVRCGEHEVARSGSVSLTER
TEGSGTPWALGVGAYARALVTGDEDDFAAAIGHLEKSPLAPYLARAHLLYGEWLRRQGRR
RDARRQLRTAYDRFADIGMAAFTDRAAAELRAAGADVRGRTSGNTDDLTAQETHIARLVA
DGATSKEVAARLFISPRTVDAHLRNIFRKLGITSRRQLRDLPALRTPTAR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgcgagcacggtcgcccgagcggcgcgcgtcggggactcgcacaggtggcccg
tggtcatggacaccgggactccctccgtcgagtcgggtagtggctcgacacgaggctcgc
actggtccggcaccgcccgcgtcggtgaaaaccacctacatcggcgcgcatactgttccc
gttgtggggacaccggtccggacgttcgtcggcaggggcgaggaacgccgcaggctcgag
gtgctggtcgcgggcgccaagaacggcgagggcggggtgctggtgctccgcggcgaggcc
ggcatcggcaagagcgctctgctcgaccacctgcggcgctcggcgcaggggatgcgggtc
atcgaggcgaccggatcccagtttgagaccgagctcccgttcgccgcgctgcaccagctg
tgcgtcccggccctgggcgacctcgcggcactacccccgccgcaccgcgcggcactggag
gcagcgttcggcctcgccgacggcacaccagagatgttccgcatcggcatggcggccctg
gaactgctggtcaccgcggcggggtcggaaccggtgctgtgcctcgtcgacgaggcccac
tggctcgacgacgcatcgacacggatactgacgttcctcgcgcggcgcatctcggccgaa
ccggtggcgatggtgctagccgcacggcacggactcgacgagctaccgagcgtcgaggtg
accgggctggccgacgacgacgcccgccggctgctggtggacacccgcgccacgctggac
gagaccgtgcgggaccgcgtgctcgccgaggccaggggcaacccgctcgcgctactcgaa
ctgcccggcgccggcggctttgccctgcccgacgcgtcctcggtgcccagcagggtcgaa
cgcagtttccaggatcgtctcgtgcccctgcccgaggacgtgcgattgctgctgaccgtg
gctagcgccgacccgaccggtgaccccggcctgctgtgggccgccgccgaacgactcggt
gtcggcccggcggccggcgcgcacgccgaggcgtccgggctggtcgagctcggcccgcgc
gtgcggttctgccacccgctcgccaggtccgcggtctaccaggccgccgccgtcgaggac
cgccacgccgcgcaccaggcgctcaccgaggtcacggacccggaacgggaccccgaccgg
cgggcctggcatcgcgcgcaggccggtgccggccccgacgaggacaccgccgcggaactg
aaccgttgcgccacccgtgccgcggcacgtgggggagtggcggctgccgcggcgttcctc
gcgcgggccgctgccctatcccgtgaccccgcgcgccgcaccgaacgcacactcgcggcc
gcgcaggcccacctcgactccggtgcactcgacgcggcggacggcctgctcaccgcggtc
acggtggacgggaccgaccccgtcgcgctggccagggtggagctgatgcgcgggcggatc
acgttcgtgcgccggcgcgacggcgacggtccggcgttcatgctgcgcgcggcccagcgc
ctcgccgcgaccgacccacggtggtcgcgggactgctttctcgacgccgtcgagatggcc
ctggtcgtcggccgggccagcggggtcatggacatggtcgtcgaggcagcgcgctcggcg
ccgccggcatcgggcccgccggacctcctggacgcgctgctgcggctggcgacggaagga
caccacgcggcggcgcggccggtccgcgagatcctcgcctcccgtccacagtggacacgg
cgaccggcgctcgccgggatgctcgccgtggagctctgggacgccgaggcacacggcgtg
atcaccgactgggtgctggcctccgcccgagagtcggggtcgccgctcacgctccgcctc
ggtcttggcatggcggcggccggcgcggtgcacaccggtgacttcgccgccgccacgtcg
gcgatcgccgaggaggaggcggtggcggacgcggtcggggtggagccgctggcgtatccg
cagctgcacctcgccgccttgcgtggccgggaggcacaggcgcgggcggtgatcgacagt
ttcaccgccgaggcgaccgcgagcggcaccgggcagacgatcgccaacgccgactgggcc
acggccgtcctgagtaacggcctcaccgactacccggcggcacttgccgccgccgaggcg
gccacccggcacggcgacctgttcgtcgccgcgatcgccctgccggaactggtcgaggcc
gcggtccgctgcggcgagcacgaggtggcccggtcgggttcggtatcgctcaccgaacgc
accgagggcagcggcacaccgtgggcgctgggcgtcggcgcctacgcccgcgcactcgtc
accggcgacgaggacgacttcgccgcggccataggtcacctcgagaagagcccgctcgcc
ccgtatctggccagggcgcacctgctctacggcgagtggctgcgccgccagggcaggcga
cgcgacgcccgccggcagcttcgtaccgcctacgaccggttcgccgacatcggcatggcg
gccttcaccgaccgcgccgccgccgagctgcgtgcggccggcgccgacgtgcgcggccgc
acgtcgggcaacaccgacgacctcaccgcgcaggagacccacatcgcccgcctggtcgcg
gacggcgccacgtcaaaggaggtcgcggcacggctgttcatcagcccccgcaccgtcgac
gcccacctgcgcaatatcttccgcaagctcggcatcacgtcccgtcgccagctccgggac
ctgcccgcactgcgtacccccaccgccagatga
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