Frankia casuarinae: Francci3_3176
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Entry
Francci3_3176 CDS
T00320
Name
(GenBank) phenylalanyl-tRNA synthetase beta subunit
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
fra
Frankia casuarinae
Pathway
fra00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Francci3_3176
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
fra01007
]
Francci3_3176
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fra03016
]
Francci3_3176
Enzymes [BR:
fra01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
Francci3_3176
Amino acid related enzymes [BR:
fra01007
]
Aminoacyl-tRNA synthetase
Class II (U)
Francci3_3176
Transfer RNA biogenesis [BR:
fra03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
Francci3_3176
Prokaryotic type
Francci3_3176
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
FDX-ACB
B5
tRNA_bind
Motif
Other DBs
NCBI-ProteinID:
ABD12533
RhizoBase:
Francci3_3176
UniProt:
Q2J859
LinkDB
All DBs
Position
complement(3763736..3766282)
Genome browser
AA seq
848 aa
AA seq
DB search
MLIVMSWLREYVAGLPPTRAVADALIRAGFEVEGLRSVGGEFSGVVVGEIVDFEIVETKK
KAVRWCQVRVAESAGAEDAGAESAGSRGEGVRGVICGAHNFAVGDRVAVALPGAVLPGGF
EITARRTYGHVSEGMICSARELGLGEESDGILVLAPRAPIGADVAELLDLADEVLDIAVT
PDRGYGLSVRGIAREAATAFALPFTDPGAPADPAAVPGPAREAYPVVVEDTAACDRYVAR
VVTGVDSRATTPLGWQRRLSLSGMRSISVPVDVTNAVLLGLGQPLHAFDRAKLAGAIIVR
RAVAGETLRTLDGVDRTLDPEDLVIADDTGPIALAGVMGGASTEVSATTTDIVLEAAHFD
PITVARTARRHRLSSEASRRFERGVDPALAPVAAALAVDLLAELAAARPEPGVTDLDHRP
APAPVTLPLTEPERLAGRPYPAEVVRRRLVDVGCAVADGSATEDLPGVLIATPPSWRPDL
TRPADLVEEIMRLEGYDTIPVTLPSLPAGRGLTAAQRMHRAVGRALAHAGFAEVLTLPFV
PEDAADALSLAAADPRRAAVRIANPIAEDAGYLRTTLLPGLIAAAVRNIGRGQRDLALFE
SGLVFRERERIPTDVVTPPVDRRPSAAEIAALDSTLPGQPRHVAALLTGRREPGGWSTPA
RDADWADAVDAAHVVAEAVGVTLTVRAGNVMPWHPGRLAELSIDGRVVGHAGELHPRVLS
DVGLPPRAGAMELDLDALIEVASAAPPMIAPTISTYPPADRDVALVVPIEVPVADVTAAL
RAGAGDLLESLTLFDVFEGAQVGVGQRSLAFGLRLRAGDRTLTAAEANAVRDAAVARAAE
LTGASLRA
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgctgatcgtgatgtcctggctgcgggagtatgtggcggggctgccgcccacgcgggcc
gtcgccgacgcgttgatccgggccggtttcgaggtcgagggactgcgtagcgtcgggggc
gagttctccggcgtggtcgtcggggagatcgtcgacttcgagatcgtcgagacgaagaag
aaggccgtccgctggtgccaggtccgggtcgccgagagcgccggagccgaggatgccgga
gccgagagcgccggatccaggggcgagggcgtgcgcggcgtcatctgcggggcgcacaac
ttcgccgtcggcgaccgggtggcggtcgcgctgcccggcgccgtgctgcccggcgggttc
gagatcaccgcgcggaggacctacggccatgtcagcgaggggatgatctgctcggcccgg
gaactgggcctcggcgaggagtccgacggcatcctggtgctcgcgccgcgggcgccgatc
ggcgccgacgtcgccgagctgctcgatctcgccgacgaggtgcttgacatcgcggtcacc
ccggaccggggctacggtctgtcggtgcgggggatcgcccgggaggcggcgaccgccttc
gcgctgccgttcacggacccgggcgcgccggcggacccggcagccgtcccggggcccgcc
agggaggcctatccggtcgtcgtcgaggacaccgcggcgtgtgaccgctacgtcgcccgg
gtggtgaccggggtcgactcgcgggccaccaccccgctggggtggcagcggcggctgtcg
ctgtccgggatgcggtcaatctcggtgccggtcgacgtcaccaacgccgtgctgctgggc
ctcggccagccgttgcacgccttcgaccgggcgaagctggccggcgcgatcattgtgcgc
cgggccgtcgccggagagacgctgcgcaccctcgacggggtcgaccgcactctcgacccc
gaggatctggtcatcgccgacgacaccggtccgatcgcgctcgccggggtgatgggcggg
gccagcacggaggtgtccgcgacgaccaccgacatcgtcctcgaggctgcgcacttcgac
ccgatcacggtggcccgcaccgcccgccggcaccggctgtcctcggaggcgtcgcggcgt
ttcgaacgcggcgtcgacccggcactcgcgccggtcgccgcggcgctggccgtcgacctg
ctcgccgagctcgccgccgcccgtcccgagcccggcgtgaccgacctggaccaccgcccc
gccccggcgccggtgaccctgccgctgacggaaccggaacgcctcgccggccggccctac
cccgccgaggtggtgcggcgccggctcgtcgacgtcggctgcgcggtggctgacgggtcg
gcgaccgaggacctgcccggtgttctgatcgcgacgccgccgtcctggcgtcccgacctg
acccggcccgccgatctcgtcgaggagatcatgcggctggaggggtacgacaccatcccg
gtgaccctgccgtcgctgcccgcggggcgcgggctcaccgccgcgcagcggatgcaccgc
gcggtgggccgggcgctggcccatgcggggttcgccgaggtgcttaccctgccgttcgta
cccgaggacgccgccgacgcgctcagcctggccgcggccgacccgcggcgtgcggcggtc
cggatcgcgaacccgatcgccgaggacgccggctacctgcggacgaccctgctacccgga
ctgatcgcggcggccgtgcgcaacatcggccgggggcagcgcgatctcgccctgttcgag
agcggtctggtgttccgggaacgcgaacggatcccgacggacgtcgtcaccccgccggtg
gatcgtcggccctccgccgcggagatcgccgctctggactcgaccctgcccggccagccc
cgccacgtcgccgcgctcctcaccgggcgccgtgagccaggtggctggtccacgccggcc
cgggacgcggactgggcggacgcggtggacgccgcgcacgtggtcgccgaggcggtgggc
gtgaccctcacggtcagagccggcaatgtcatgccctggcacccgggccgcctcgcggag
ctctcgatcgacggccgggtcgtgggccacgcgggtgagctgcacccccgggtgctcagc
gacgtcgggcttccgcctcgggccggcgcgatggaactggacctcgatgccctgatcgag
gtcgcgtcggcggcgccgccgatgatcgcgccgacgatctccacctatccgcccgccgac
cgggatgtggcgctcgtcgtgccgatcgaggtgccggtcgccgatgtgacggcggcactg
cgggccggagccggtgacctgctggagtccctgaccctcttcgacgtcttcgagggcgcc
caggtcggggtcggtcagcgctcgctggccttcggcctgcggctgcgcgccggggaccgg
acgctgacggccgccgaggcgaacgcggtgcgggacgcggcggtcgcccgggcggcggag
cttaccggcgcgtccctgcgcgcctga
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