Frankia casuarinae: Francci3_3338
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Entry
Francci3_3338 CDS
T00320
Name
(GenBank) hypothetical protein
Organism
fra
Frankia casuarinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrwC
AAA_30
AAA_19
TraI_hel_assoc_N
Viral_helicase1
AAA_22
AAA_11
UvrD_C_2
Motif
Other DBs
NCBI-ProteinID:
ABD12695
UniProt:
Q2J7P7
LinkDB
All DBs
Position
complement(3955805..3960367)
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AA seq
1520 aa
AA seq
DB search
MIATVKVLTLRARDGETVARAARAVVAYVEGGQPGAVAPLRRYYGEGLVPGWARGSAAYL
VGLDAGRPVAGEALERLLRGEHAVTGRPLLTALGSAGRASPPVEGQRSAGPGGGLLTLAQ
AARRAGVSAAYLRALAVRTAAMATAERSASRGGDADAGGSAQGADRAVHERTGAAGMRRG
PSAGSVPGDEGRAVDNGVGEGRGPWLAAVREAGTGRWLVSATEVDRFCAARVPPAVVLGY
DVTCSAPKSVSLLWAFGDEEIRRDVAAAMDAGVEAVLGYLERHATVGTVAGRNRPGVGVA
AVSYPHEVSRSDEAHLHVHSIVVNATAVPDLDEQGRPVADEQGRGRVDWRALDGEVFLSH
VKTAGYVGAAALRHELSRRRGLAWGPVRNGVAELAAFPAQLLAAFSTRHGEVQAEYAQLV
ADGLTPGGVTEAAAQRGSRAAKKVLADAQVRRIQHERLTAAGWTPQRVRALAAPASRNRA
PVDGEDLAGLCDLLTGPAGLTEHDSTFDRRAVVRRVAAWAADRLPADEVDRLTDQVLADR
RIVLLGHSAARARQQPEPVYTTQELLEVEDTLLALCRQGRVEAGAQPRILVDPATLEAHL
AAAQQRPSSDGPGGVGGEDGGGQGNGGQGSGGPSGPALSAEQITLVRRLLTSGDLVRPVV
GPAGSGKTEAMRLLTRIVHAGGGQVFAAAHGGRQTEELTGRIGVAGRVVSGWLTLLDHTE
DPGRVWPAGSVVIVDEATQVSTRDAARLARYASRTGTVLILLGDPAQLGAVGAGGWYAHL
VASTPDVPALGSLHRQTGAALAPVRAALGALRAEGGASARKALELLAADGRIRLFDSREA
LLAQVVNDWYTERTAPHPRGATDPDSATDPGSVDGAGSTEGDGWTAAGPGRRRSGGTVRP
RPAAALHMMAERTRDVEILARAARDRLAADGTLTGPVLTVAGRDFQAGDEVITLTQTGHT
LIPAGKPASAYIRTGTLGRVTAVHLDPDHPDRQALTVRFPRKGSVRVPWEYLTHRFTDGR
TGGLGYAYAITAAKAEGSSLPTARAVAPDDTSRAGLYVMLSRARTDLAAYVIRRADLEAD
LDEEDWLPVLRDPTGPLERFADHLAQSRTERLASEYDPLAHAAHRLRRTHTLAGLARLPA
PPPSGGAHRAAGAPPAPPAPPAVLRRAELAAEAALRTAAVANPPADLVARIGPRPAAAGA
DRALWDRAVGALAVHHARYRPAVPPHDPGPPLSSGEPAGTLRARWMLHHDQATRLARTWA
DVLPRRARARFHSRAEQIPRARAIAGLHALLDNGHQPADLLVALTREDQSSVRTGAAVLD
HRVTDLCQQQGLHPTDYLLPPPRPARDEWNELVGLLDTCEIHHLARHPTAQLAAERRHLR
DAQGATVPRARPHGEGSRASTVEARTGRQDRLRLIEEALDRQIAHAVFRAGIDPADYLTG
LLGARSSAGLDATGWDSRVEAVEGFRHRDLGLPYGTPATTDGETDPLRRAVGDRPTDPAL
AEGYRGIRALIREHTPTLDL
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgatcgctacggtgaaggtattgacgttgcgggcccgggatggggagacggttgctcgg
gcggcgcgggcggtggtggcctacgtggagggtgggcagccgggggcggtggcgccgttg
cgccggtactacggcgaggggttggtgcccgggtgggcgcgcgggtcggcggcgtatctg
gtcgggttggacgcgggccggccggtggcgggggaggcgttggagcggctgctgcgcggg
gagcacgcggtgacggggaggccgttgctgacggcattggggtcggcgggtcgggcatcg
ccgcccgtggaggggcagcgttcggccgggccgggcggggggttgttgacgttggcccag
gcggcgcggcgggcgggggtgagcgcggcctatctgcgtgcgctggcggtacgcaccgcg
gccatggccaccgcggagcgctcagcctcccgcggtggcgatgccgatgccggcgggtcg
gcgcagggtgccgatcgggcggtgcacgagcggacaggcgcggccgggatgcgacgtggc
ccctcggcgggcagcgtgccgggggatgagggccgggcggtggacaacggggtgggggag
gggcggggtccgtggttggcggcggtgcgggaggcggggacgggccggtggctggtgagt
gcgacggaggtggatcggttctgtgccgcgcgggtgccgccggcggtggtgttgggctat
gacgtgacgtgttcggcgccgaagtcggtgtcgttgctgtgggcgttcggggatgaggag
attcgccgggatgtggccgcggcgatggacgccggtgtggaggcggtgctcggctatctg
gaacggcatgcgacggtgggcaccgttgccggccggaaccgtccgggggtgggggtggcg
gcggtgtcgtacccgcatgaggtgtcgcggagcgacgaggcccatctgcatgtgcattcc
atcgtggtgaacgcgaccgccgtccccgatctggatgagcaaggccggccggtggccgat
gagcagggccgggggcgggtggactggcgggcgttggacggggaggtgttcctctcccac
gtgaagaccgctggctatgtgggggcggcggcgctgcgccatgagctgtcccggcggcgc
ggactggcctgggggccggtgcgtaacggggtggctgaactcgccgccttccccgcgcag
ctgctggcggcgttctccacccggcatggggaggtccaggccgagtacgcccagctcgtc
gccgacgggttgacgccgggtggggtgaccgaggcggcggcgcagcgcggttcccgggcg
gcgaagaaggtcctcgctgacgcgcaggtccgccgcatccaacacgaacggctgacggcc
gccggatggacgccgcagcgggtccgcgcccttgccgcacccgcctcccggaaccgggcc
ccggtcgacggtgaggacctggccgggttgtgcgacctgctgaccggcccggccggattg
accgagcacgactcgacgttcgaccgccgtgccgtggtacgacgggtggccgcctgggcc
gccgatcggctgcccgcggacgaggtcgaccggctcaccgaccaggtgttggccgaccgg
cggatcgtcctgctcggccacagcgccgcccgggcccgccagcaacccgagccggtgtac
acgacgcaggaactgctcgaggtcgaggacaccctgctggccctctgccggcagggccgg
gttgaggccggcgcgcagccgcggatcctcgtcgacccggccacgctcgaagcccatctc
gccgccgcgcagcagcggccgtcatcggacggcccgggtggcgtcggcggcgaggacggc
ggcggccaggggaacggcggccaggggagcggtgggccgtcggggccggcgctgtcggcc
gagcagatcaccctcgtgcgccggctgctcacctccggggatctggtgcggccggtcgtc
gggccggcggggtcggggaagaccgaggcgatgcgcctgctgacccggatcgtccacgcc
ggcggcgggcaggtgttcgccgccgcgcacgggggccggcagaccgaggaactcaccggc
cggatcggggtggccgggcgggtggtgtccggctggctgaccctgctcgatcacactgag
gatccgggccgggtgtggccggcgggcagcgtggtcatcgtggatgaggccacgcaggtc
tcgacccgggacgccgcccgactggcgcggtatgcgtctcggaccgggaccgtgctgatc
ctgctcggtgacccggcgcagctcggcgcggtcggcgccggcggctggtacgcccatctc
gtcgcctccacccccgacgtgccggcgttgggcagtctgcaccggcagaccggcgcggcg
cttgcgccggtccgcgccgccctcggcgcgctgcgcgccgagggcggcgcgtcggcgagg
aaggctctcgagctgctggccgcggacgggcggatccgcctgttcgactcccgcgaagca
ctgctcgcccaggtcgtcaacgactggtacaccgaacgcaccgcaccgcaccctcgaggc
gccaccgacccggacagtgccaccgacccgggcagcgtggacggcgcgggcagcacggag
ggcgacgggtggacggccgccggtccgggacggcgccggtcagggggtacggtccggccc
cgacccgcggcagcgttgcacatgatggccgagcggacccgcgacgtggagatcctcgcc
cgcgccgcccgtgaccgtctcgccgccgacggcaccctgaccggaccggtcctgaccgtg
gcgggccgggacttccaggccggcgacgaggtcatcaccctgacccagacgggtcacacc
ctgatccccgccggtaagcccgcctcggcctacatccgtactggcaccctcggccgggtc
accgccgtccacctggatcccgaccatcctgaccggcaggccctcaccgtccgctttccc
aggaagggcagcgtgcgggtgccgtgggagtacctcacccaccggttcaccgatggtcgc
accggcggtctcggctacgcctacgcgatcactgcggcgaaagccgaaggctcctccctg
cccaccgcacgagccgtcgcccccgacgacaccagccgcgccggcctctacgtcatgctc
tcccgagcccggaccgatctcgcggcctacgtcatccgccgggccgatctcgaagccgac
cttgacgaagaagactggctgcccgtcctgcgtgacccgaccggacccctcgaacgcttc
gccgaccacctcgcccagtcccgcaccgaacgcctcgccagcgagtacgacccgctcgcc
cacgctgcccaccggctgcggcgcacccacaccctcgccggcctcgcccgactccccgca
cccccgccatccggcggcgcgcaccgcgcggccggcgcgccgcccgcgccgcccgcgccg
cccgccgtgctgcgacgcgcggaactcgcagcggaagcggccctgcgcaccgccgccgtc
gccaacccgcccgccgatctcgtcgctcgcatcgggccacgacccgccgccgccggcgcc
gaccgcgctctgtgggaccgggccgtcggcgccctcgccgtccaccacgcccgctaccgg
ccggccgtcccaccccacgaccctggacccccactctcatccggcgaaccggccggcacc
ctacgggcccggtggatgctgcaccatgatcaggccacgcgcctcgctcgaacctgggcc
gacgtcctaccccgccgggcccgcgcccgcttccacagccgcgccgaacagatcccccgc
gcccgcgccatcgccggcctgcacgccctgctcgacaacggccatcagcccgctgatctt
ctcgtcgcgttgacccgcgaggaccagagcagcgtccgcaccggcgccgccgtgctcgac
caccgcgtcaccgacctctgccagcagcagggactccaccccaccgactatctcctcccc
ccgccgcgtccggcccgcgacgagtggaacgagctcgtcggcctgctcgacacctgcgag
atccaccacctggcccgtcaccccaccgcccagctcgccgccgaacgccgccacctccgc
gacgctcaaggcgcgaccgtcccgcgggcgaggccacacggagaaggcagccgggcaagc
accgtcgaggcacgcaccggccgccaggacaggctccggctgatcgaggaagccctcgac
cggcagatcgcgcacgccgtgttccgggccggtatcgaccccgccgactacctcaccgga
ctcctcggtgcccgttccagcgcaggcctggacgccaccggatgggatagccgggtcgag
gccgtcgaggggttccgccaccgcgacctcggcctgccctacggcaccccggccaccacc
gacggcgagaccgacccgctgcgccgcgccgtcggcgaccggcccaccgatccggccctc
gcggagggctaccggggaatacgtgcgctgatccgggagcacaccccaaccctcgattta
tga
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