Frankia casuarinae: Francci3_3597
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Entry
Francci3_3597 CDS
T00320
Name
(GenBank) condensin subunit Smc
KO
K03529
chromosome segregation protein
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fra03036
]
Francci3_3597
Chromosome and associated proteins [BR:
fra03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
Francci3_3597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ABD12949
RhizoBase:
Francci3_3597
UniProt:
Q2J6Z3
LinkDB
All DBs
Position
complement(4296046..4299714)
Genome browser
AA seq
1222 aa
AA seq
DB search
MHLKNLTLRGFKSFASSTSLHLEPGITCVVGPNGSGKSNVVDAIAWVLGEQGAKALRGGT
MSDVIFAGTPARPALGRAEVLLTIDNSDGALPIEYTEVTIGRLMFRSGESEYTINGTGCR
LLDIQELMSDSGIGRELHVIVGQGQLDAVLHARPEDRRAFIEEAAGVLKHRKRKEKALRK
LEAMSANLTRLTDLSAELRRQLGPLGRQAEIARKAGVIQASLRDARLRLLADDLHRAQVA
ITSDLADEEALRARLTTTEAAHAAAARREEQLQADLTAIIPRATGAQETWYALASLRERL
RGTRSLAVERGRLLRAATDDVRGRRDPEELEQEATAVREQEIALTERLERDRDLLAEVVT
RRADLEAALAQEEKELIAAARAASFRREEIARLAGQVEAARSRATSAENEIARTTEALDA
ARERETETSASRSALEIELSRMESAREDLAEQHSAAVAVHAAAAERLEVLRGEERSAERD
RASWAARCDALHLSLSPADGAAALLRAATGAQTGQTASNTAEDSAPALDPTLEVIGRLAG
VLSVTAGAEAAIAAALGPAADALLVGTSGDAMAAFAWLRETDAGRAALVAAVTVADEPDA
CAGPDACAGPDGSAAIVPGAASADGPLPAGAVAALDLVEIGDDRFRTAVSSLLARTVVVE
DLAAAERATALRPDLRVVTRAGDVIGAPLSIGGSANPPSAIELQAAADEAEAGVAEATRR
VESAHEAFEPARAEVTRARTAIDAALAALHGTDARHRALSEQMARLDRSGGAAASEIARL
EGARSRAETARDRAYGALTELEASLAATSEQPEAGERAPDERDRLVAATSAVRAAEVEAR
LAVRTSEERVRGLQGRADGLIRAAANERAARAAAARRHEVRERQAAVATAMGDAAQVALD
RLDHSLARAAAGREEADALRKAAETELVGVRDQGRALATELAALRDAAHRDELARAEKRL
RVETLEAKALEEHGIDADDLVAEFGPDTLVPPDEPDGTAAPFDRAEQSARAATAEKQLAR
LGRVNPLALEEFAALQERAAFLSAQLEDIKSTRRDLLLVVEEVDLRVREVFAVAFADTAR
EFEIVFSTLFPGGEGRLVLTDPDDMLTTGIEVEARPPGKKVKRLSLLSGGERSLTALALL
LAIFRARPSPFYVLDEVEAALDDRNLGRLLEAVEGLREKSQLIIITHQKRTMEIADALYG
VAMRGDGVTTVISQRLRERAAL
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
gtgcatctcaagaacctgaccctgcggggcttcaagtcctttgcgagctcgacctccctg
catctcgagccgggaataacctgcgtggtcgggcccaacgggtcgggcaagagtaacgtc
gttgacgccatcgcctgggtactgggggagcagggtgccaaggccctgcgtggcggcact
atgtccgatgtcatcttcgcgggcacgcccgctcgcccggccttggggcgcgccgaagta
ctcctgacgatcgacaactcggacggcgcgctccccatcgagtacaccgaggtgaccatc
gggcgactgatgttccgcagcggcgagagcgaatacacgatcaacggtaccggttgtcgc
ctgctggatatccaggaactgatgagcgactcgggtatcggccgagagttgcacgtgatc
gtcggccagggccagctcgacgcggtcctgcacgcgcgcccggaggatcgccgtgcgttc
atcgaggaggccgccggcgtcctcaaacaccgtaaacgcaaggagaaggcactccgcaag
ctcgaggcgatgtcggcgaacctcacccgcctcaccgatctgtccgccgaactgcgtcgg
cagttagggccgctcggtcggcaggcggagatcgcccgtaaggccggtgtgattcaggct
tcgctacgggacgcccgcctgcgccttctcgccgacgatctccatcgtgcccaggtcgcg
atcacctccgacctcgcggacgaggaggcattgcgggcgcggctgacgaccaccgaggcc
gctcacgccgcggccgcccgccgtgaggagcagctgcaggccgacctgacggcgatcatt
ccgcgcgccaccggcgcccaggagacctggtacgccctggcatccctgcgggaacggctg
cggggcacccgttccctcgccgtcgaacggggtcgcctgttgcgtgccgcgaccgacgac
gtacgtgggcgccgcgaccccgaggaactggaacaggaggccacggcggtccgggagcag
gaaatcgccctcaccgagcggctggagcgtgatcgggatctgctcgccgaggtggtcacc
aggcgtgccgatctcgaggccgcgctcgctcaggaggagaaggaactgatcgccgcggca
cgcgcggcgtcttttcgccgtgaggagatcgcgcgccttgccggccaggtggaggccgcc
aggtcccgtgccaccagtgccgagaacgagatagcacggacgaccgaggcactcgacgcc
gcgcgggagcgggagaccgagacctcggcgtcacgttcggccctcgagatcgaactctct
cggatggagagcgcacgggaggatctcgccgagcagcacagcgcggccgtggcagtgcat
gccgctgccgccgagcggctcgaggtcctgcgcggtgaggagcgtagcgccgaacgtgac
cgcgcatcctgggccgcgcgatgcgacgcgctgcacctctccctctcgccggccgacgga
gccgcggcactgttgagggctgctaccggcgcgcagaccgggcagaccgcctcgaacacg
gcggaggactcggctccggcactggatccgaccctcgaggtgatcggccggctggccggc
gtcctgagcgtgaccgccggcgcggaggcggccatcgccgcggcgctgggcccggcggcg
gacgccctgctcgtcggcacgtcgggggatgccatggcggcctttgcgtggctgcgggaa
acggatgccggccgagcagcgctggtggccgccgtcaccgtcgcggatgagcctgacgcc
tgcgccggccctgacgcctgcgccggccctgacggcagcgcggcgatcgtcccgggggcg
gccagcgccgacggtccgctcccggccggtgccgttgccgcgctggacctggtggagatc
ggtgacgatcggttccgtaccgccgtgtcgtccctgctcgcccggactgtcgtggtcgag
gatctggcggcggccgagcgggccacggcgttgcgccccgacctgcgggtggtcacccgc
gccggcgacgtcatcggtgcccccctctctatcggtggcagcgcgaacccgccgtccgcg
atcgaactgcaggccgcggcggacgaggccgaggccggcgtggcggaggcgacccgtcgc
gtcgagtccgcccacgaggcgttcgagcccgcgcgtgccgaggtgacccgggcccgtacc
gccatcgacgcggcactggcggcgctgcacgggaccgatgcccggcaccgggcgctgtcc
gagcagatggcgcggctcgatcgttcgggaggggccgcggcatccgagatcgcccggttg
gagggcgcccgatcacgggccgaaacagcccgtgatcgggcatacggagcgttgaccgag
ctcgaggcgtcgctcgccgcgacatcggagcagccggaggcgggggagcgggctccggat
gaacgagaccggctcgtcgcggctacctccgccgtgcgcgccgccgaggtcgaggcccgg
ttggccgtccgtaccagcgaggagcgggtgcgaggcctgcagggacgcgccgacggactg
atccgcgcggcggcgaacgagcgggcggcacgggccgcggcggcccgtcggcacgaggtc
cgcgagcggcaggcggccgtcgcgacggcgatgggggatgcggctcaggtcgctctcgac
cgactggaccattcgctggctcgcgccgcggcggggcgggaggaggccgacgcactgcgc
aaggccgccgagacggagctggtcggggtgcgtgaccaggggcgcgctctggccaccgaa
ctcgcggcgctgcgcgacgccgcccatcgcgacgagctggcccgagcggagaagcggctg
cgggtggagaccctggaagccaaggctctggaggagcacggtatcgacgccgatgacctg
gtggccgagttcggcccggacacgctggtcccgccggatgagcccgacggcaccgcggcg
ccgttcgatcgagccgagcagagcgcccgggccgccaccgcggagaagcagctggcccgg
ctggggcgggtgaatcccctggccctcgaggagttcgccgcgcttcaggagcgggccgcg
ttcctgtccgcgcagctcgaagacatcaagagcacccgccgggatcttctgctggtcgtc
gaggaggttgatctgcgggtgcgtgaggtcttcgccgtcgcgttcgcggacaccgcccgt
gagttcgagatcgtcttctcgacgctgttcccgggcggtgagggccggctggtgctcacc
gatcctgatgacatgctcaccacgggcatcgaggtcgaggcgaggccgccgggaaaaaag
gtgaagcgtctgtcgctgttgtccggcggggagcgttcactgaccgcactcgctctcctg
ctcgcgatattccgggcccgcccttcgcccttctacgtgctcgacgaggtcgaggcagct
ctggacgaccgcaatctcggccgactgctcgaggccgtcgagggtctgcgtgagaagtcg
cagctgatcatcatcacccaccagaagcggacgatggagatcgctgacgccctgtacggc
gtggccatgcggggcgacggggtgacgacagtgatcagtcagcggctgcgggagcgggcg
gcgctctga
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