Frankia casuarinae: Francci3_3601
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Entry
Francci3_3601 CDS
T00320
Name
(GenBank) RNAse III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fra
Frankia casuarinae
Pathway
fra03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
Francci3_3601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fra03019
]
Francci3_3601
03009 Ribosome biogenesis [BR:
fra03009
]
Francci3_3601
03036 Chromosome and associated proteins [BR:
fra03036
]
Francci3_3601
Enzymes [BR:
fra01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Francci3_3601
Messenger RNA biogenesis [BR:
fra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Francci3_3601
Ribosome biogenesis [BR:
fra03009
]
Eukaryotic type
90S particles
RNase
Francci3_3601
Prokaryotic type
rRNA processing factors
Francci3_3601
Chromosome and associated proteins [BR:
fra03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Francci3_3601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DSRM_2
RM44_endonuclase
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
ABD12953
UniProt:
Q2J6Y9
LinkDB
All DBs
Position
complement(4303309..4304121)
Genome browser
AA seq
270 aa
AA seq
DB search
MTRQLPPPPPRDGLIEVLEVAIDPELLDRALTHRSYAYEKGGLPTNERLEFLGDAVLGLV
VTAALFIRHPDLPEGQLAKQRASVVNMRALADVARGIGPTGLGPYLLLGRGEETTGGRDK
ASILADTLEAIIGAVYLSSGLDVASGFVHRLFDPLLDEAAGRGAGLDWKTSLQEQTAVLA
LGPPEYIVEEAGPDHAKRFTAYARIAGEPLGEGEGGSKKEAEQRAAAAAFAVLEERSALG
REDGSGADVAGGNHEKSAVGSLDHDQVSGL
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgacccgccagctgccacccccgccgccgcgggacggcctgatcgaggtactcgaggtc
gccatcgaccccgagctgctcgaccgcgccctcacacaccgctcctatgcctatgagaag
ggcggcctgcccaccaatgaacgcctggagttcctgggcgatgcggtgctcggtctggtg
gtgacggcggcactgttcatccgccacccggatcttcccgaggggcagctcgccaagcag
cgggcctcggttgtgaacatgcgggctctcgcggacgtggcacgggggatcggacccacc
gggctcggtccgtacctgctgctgggccggggcgaggagaccaccggggggcgcgacaag
gcgagcattctcgccgacaccctcgaggccatcatcggggcggtctatctgtcctcaggc
ctcgacgtggcctccggtttcgtgcaccgtctcttcgatcccttgctggacgaggccgcc
ggccgaggcgcagggcttgactggaagacctcactgcaggaacagacggcggtgctggct
ctcgggccgcccgaatacatcgtcgaggaggccggtccggaccacgcgaagcgattcacc
gcctacgcgaggatcgcgggagagccactgggcgagggcgaagggggaagcaagaaggag
gccgagcagcgggcggccgccgcggctttcgcggttctcgaggaacggtcagccttgggg
cgggaggacggttcgggcgcggacgtcgccggcggaaatcacgagaagtccgccgtcggc
agccttgatcacgatcaggtctcgggtctgtga
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