Frankia casuarinae: Francci3_3744
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Entry
Francci3_3744 CDS
T00320
Name
(GenBank) UvrD/REP helicase
Organism
fra
Frankia casuarinae
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PHP_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABD13095
UniProt:
Q2J6J7
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Position
complement(4481721..4485095)
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AA seq
1124 aa
AA seq
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MRSRFYADVHIHSRYSRACSRDCDLEHLAWWAARKGIAVVGTGDFTHPAWSQEIATKLVP
AEPGLFRLRSDLEHEVLRTLPASCRTATRFMISSEISTIYKRGDRTRKVHHLLYAPDREA
AGRITAALARIGNLAADGRPILGLDSRDLLEITLGGGAGCYLVPAHVWTPWFAVLGSKSG
FDAVEDCYGDLADEVFALETGLSADPEMFWRISGLDRYRLVSNSDAHSPPMLGREATAFT
CDLDYFSIEAALRGGDGFAGTVEFFPEEGKYHLDGHRKCGVVLTPDQTREVGGRCPTCGG
GLTVGVLNRVEALADRRPGHRPVTAPDVTSLVPLPEVVGEILGVGPKSKAVAGQVTSLVS
RLGPELDILGDVPLTDIAGVGSPELVEAISRLRRGEVIRQAGFDGEYGVIRLFEPRELAR
DGGTLFDLGSGAAGGQDRIDAGPSLDEALAARARPAPDAAVVPGDAAVADSQLFTPVSGD
TPSVLDGLDPEQRLAASHLSGPLLVLAGPGTGKTRTLVHAIAHRVAEHGVPAGECLAVTF
TRRAAGELAERLAGLLGDAAGRVLATTFHGLGLTIIREQHAKLARGPQVQVADDAVRVEL
IAAALHGEGDARTRRRVAAGVAELKRHRALGQAIRDHDLVGALARYDAALRDRDMVDLDD
LITLPLTLLRSSPDLAEHYQRRWRHVWVDEYQDTDELQYRLLGLLCPPTANLCVIGDPDQ
AIYSFRGADVRFFLRFEQDYPSARPVALTRGYRSTRTIVRTALDVIAPTSLVPDRTLTAV
RGAEGDGPVLLRRYRSEAEEAIAVVDTIDAALGGTSFHALDSGVDGSVDAGFSFADIAVL
YRTARQAEPIMEALATRGFPFQRRSHLPLADAPAVADLLALLQDLTTTDPSGPGVPRPVS
GLLRDAAARATDLAEARRSELGAVPSDGFPGFSGGRVPTEAELRLAVELLAPAAAAAGND
LAGFLTSVTLAAEVDGLDPRADRISLLTLHASKGLEYGLVIIVGCEDGLLPMRFGPAGEA
PGGGIPGGGVNGTADGTADAGTKDAEAEERRLFFVGVTRARHRLVLTSAASRRRAGSVVT
TRPSPFLADIRPALLSSVPAEGVPAEGGRRRSRRPAPGKQLRLL
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
gtgaggtcacggttctacgctgatgtgcacattcactcccggtactcgcgtgcctgcagt
cgtgactgcgatctggagcacctggcctggtgggcggcacgcaagggcatcgccgtcgtc
ggcaccggcgacttcacccatccggcctggtctcaggagatcgcgacgaagctggtcccg
gccgagcccggcctgttccggctgcggtccgatcttgagcatgaggtgctgcgcacgtta
ccggcctcctgccggacggcgacccgcttcatgatctctagtgagatctcgacgatctac
aagaggggcgaccggacccgtaaggtccatcatcttctctacgctcccgaccgggaggcc
gccggacggatcacggcggcgctggctcggatcggcaacctcgccgcggacgggcgtccc
atcctgggcctggactcccgcgatctgctggagatcacccttggtggcggggcgggctgc
tatctggtcccggcgcacgtgtggacgccctggttcgcggttctcggttcgaagtccggg
ttcgacgccgtcgaggactgctacggcgacctcgccgacgaggtcttcgccctggagacg
gggctttcggcggacccggagatgttctggcggatctccggtctcgaccgctaccggctg
gtgagcaactctgacgcccactccccgccgatgctcggccgggaggcgaccgcgttcacc
tgcgacctcgactacttctccatcgaggccgcgctgcgcggcggggacggcttcgcgggg
accgtcgagttcttcccggaagagggcaagtaccacctcgacgggcatcgcaagtgcggg
gtggtcctcacgccggaccagacccgggaggtcggcggacgctgccccacctgcggcggt
ggcctcaccgtcggggtcctcaaccgggtcgaggcgctggccgaccggcggcccggccac
cgccccgtcacggcgcccgacgtcacctcgctggttccgttgccggaggtcgtcggggag
attctcggcgtgggcccgaagagcaaggcggtcgcgggccaggtgacgtcgttggtctcc
cgtctgggcccggagctcgacatcctcggcgacgtaccgctcacggacatcgctggggtc
ggatcgccggagctggtcgaggcaatcagtcgcctgcgccgcggggaggtgatccggcag
gccgggttcgacggcgaatacggcgtcatccggttgttcgaaccccgggagctcgcccgg
gacggtggcaccctgttcgacctggggtccggcgcggctggtgggcaggaccggatcgat
gcgggaccctccctcgacgaggcgctcgcggcgcgggcgcgtccggcacccgatgccgcg
gtggtgccgggggatgccgcggtggccgacagccagctgttcacgccggtttccggcgat
accccgtcggtgcttgacgggctggatcccgagcagcggctggcagcctcgcacctgtcc
ggtccgctgctcgtcctcgccggaccgggaacgggcaagacccgtacgctggtccacgcg
atcgcacaccgggtcgctgagcacggggtgccggccggggagtgcctggcggtcaccttc
acccggcgtgcggccggggagctcgccgaacggctagccggcctgctgggtgacgccgcg
ggacgggtgctcgcgacgaccttccacggcctcgggcttacgatcatccgtgagcagcac
gcgaaactcgcccggggcccgcaggtccaggtcgcggacgacgcggtgcgcgtggagcta
atcgccgcggcactgcacggtgagggcgacgcccgaacgcgccggcgggtggcggccggt
gtcgccgagctcaagcggcaccgagcgctcggccaggcgatccgcgaccacgacctggtc
ggggcgctcgcccgttacgacgccgcgctgcgcgatcgggacatggtcgatctcgacgat
ctgatcaccctgccgctgaccctgctgcggtcgtccccggatctcgccgagcactaccag
cggcggtggcgccacgtctgggtcgacgagtaccaggacaccgacgaactccagtaccgc
ctgctggggctgttgtgtccccccacggccaacctgtgcgtgatcggcgacccggaccag
gctatctacagcttccggggtgcggacgtccggttcttcctgcggttcgagcaggactac
ccgagtgcccgcccggtcgccctgacccgcggctaccgatccacccgcaccatcgtgcgg
acggcgctcgatgtgatcgcgcccacgagtctggtcccggaccggaccctgaccgccgtg
cggggcgccgagggcgacggcccggtgctgctgcggcgctaccgcagtgaggccgaggag
gcgatcgccgtcgtcgacacgatcgacgcggcgctcggcggtacctcgttccacgcgttg
gactcgggggtggacggatcggtcgacgcggggttctccttcgcggacatcgccgtgctc
taccggaccgcccgccaggccgagccgatcatggaagcgctggccacccgcggtttcccg
ttccagcggcgctctcatctcccgctcgcggacgctcccgcggtcgccgacctgctcgcc
ctgctgcaggacctgacgaccacggatccctcgggtcccggcgtcccgcgtccggtgtcg
ggtctgctgcgcgacgcggcggcacgggccaccgatctcgccgaggcgaggagaagcgag
ctcggcgccgtgccgtccgacgggtttcccggcttctccggcggacgggtgccgaccgag
gccgagctgcgcctggcggtggagctgctcgcaccggccgccgcagcggcaggcaacgac
ctggcgggtttcctcacgtcggtcacgctcgccgccgaggtcgacgggctggacccgagg
gcggaccggatctcgctgctgaccctgcacgcgagcaagggtctggaatacggcctggtc
atcatcgtcggttgtgaggacgggctgctgccgatgcgcttcggtccggccggtgaggcg
ccgggcggtgggatcccgggcggtggcgtcaacggaaccgccgacggaaccgccgacgcc
ggcacgaaggacgccgaggcggaggagcgccgactcttcttcgtcggcgtcacccgggcc
aggcatcggttggtcctcacctcggcggccagccggcggcgcgccgggtcggtcgtgacg
acccgtccctcaccgtttcttgcggacatcaggccggctttgctgtcctctgtcccggcc
gagggcgtcccggccgagggcgggcggcgccggtcgcgccggccggcaccgggcaagcag
ttgcgactcctctga
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