Frankia casuarinae: Francci3_3919
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Entry
Francci3_3919 CDS
T00320
Name
(GenBank) Uracil-DNA glycosylase superfamily
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
fra
Frankia casuarinae
Pathway
fra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Francci3_3919
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_3919
Enzymes [BR:
fra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Francci3_3919
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Francci3_3919
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ABD13269
UniProt:
Q2J623
LinkDB
All DBs
Position
complement(4687378..4688193)
Genome browser
AA seq
271 aa
AA seq
DB search
MRSGGPVRPGSGWPGDLAAADTPVAATPGEVRALAADATGTRELDARMSVCRACPRLVTW
REEVAAVRRAAFAEQAYWGRPVPSFGPGDARILVIGLAPAAHGGNRTGRIFTGDRSGDWL
FASLHRVGLAALPTSVSAGDGQRLTATRIVAVVRCAPPANKPTTTERDTCRPWLVRDLEL
VRSTLRVIVVLGGFAWSALWPALVQAGFPVPPRRVSFGHGVRVELPVSGVSVVGCYHPSQ
QNTFTGRVTEVMLDTIFGTAAELAEVVERAG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtcagggggtccggtgcgaccgggaagcggttggccgggggacctcgccgccgcc
gacacaccggtcgcagccacgccgggcgaggtccgcgcgttggccgccgacgcgacgggc
acccgggagctcgatgcccggatgtccgtctgccgggcctgcccgcgcctggtcacctgg
cgggaagaagtcgcggcggtgcggcgggcggccttcgccgagcaggcctactgggggcgt
ccggtgccctcgttcggcccgggcgacgcccggatcctcgtcatcggtctggcgcccgcg
gcccacggagggaaccgcaccggacgcatcttcaccggggaccgcagcggcgactggctg
tttgcctcgttgcaccgcgtcgggctggcggcgctgccgacctcggtgtccgccggggac
ggtcagcgtctgacggccacgcgcatcgtcgccgtcgtccgttgcgctccgcccgcgaac
aagccgaccactacggagcgtgacacctgtcggccctggttggtgcgtgacctggagctt
gtccggtccaccctgcgggtcatcgtcgtcctcggtggattcgcctggtccgccctgtgg
cccgccctggtccaggccggattcccggttcctccgcgccgggtgtcgttcgggcacggc
gtgcgggtcgaacttcccgtatccggggtgtcggtcgttggttgctatcacccaagccag
cagaacaccttcaccggtcgggtcaccgaagtgatgcttgacacgatttttggcacggcg
gcggagctcgcggaagtggttgagcgggccgggtaa
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