Frankia casuarinae: Francci3_4188
Help
Entry
Francci3_4188 CDS
T00320
Name
(GenBank) isopentenyl-diphosphate delta-isomerase
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
fra
Frankia casuarinae
Pathway
fra00900
Terpenoid backbone biosynthesis
fra01100
Metabolic pathways
fra01110
Biosynthesis of secondary metabolites
Module
fra_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
fra_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
Francci3_4188
Enzymes [BR:
fra01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
Francci3_4188
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ABD13536
UniProt:
Q2J5A6
LinkDB
All DBs
Position
4999976..5000635
Genome browser
AA seq
219 aa
AA seq
DB search
MSPQGSDSDVVTVPRDAASPQTVSRDTASVPPADEVVLLDAERRPCGTAPRIAVHGLDTP
LHLAFSSYLFDPSGRLLVTRRALDKRTWPGVWTNSCCGHPRPGEDLARAVERRVGQELRL
ELTDLHCALPDFAYRATAADGLVENEVCPVYVARALGDPDPDPAEVVEWRWVEWDDYRRV
AAAAPWALSPWSVDQMAAFSAAAHPLTAALSLVSGGTHA
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
gtgagcccgcaaggatccgactccgacgtcgtgacggtgccgcgtgacgcggcgtcacca
cagacggtgtcgcgtgacaccgcgtcggtcccgcccgccgacgaggtcgtgctcctcgac
gccgaacgccgcccctgcgggacggcgccgcggatcgccgtgcacggcctcgacaccccc
ctgcacctggcgttctcgtcctaccttttcgacccgtccggcaggctgctcgtcacccgc
cgggcgctcgacaagcggacctggccgggggtgtggacgaacagctgctgtgggcatccc
cgcccaggcgaggatctggcgcgggccgtcgagcgccgggtaggccaggaactccgcctg
gagttgaccgacctgcactgcgcgctgccggacttcgcctaccgcgccaccgccgccgac
ggtctcgtggagaacgaggtctgcccggtctacgtggcgcgggcgctcggggacccggat
ccggacccggccgaggtggtcgagtggcgctgggtcgagtgggacgactaccgccgggtg
gccgccgccgcgccctgggcgctaagcccctggtcggtcgaccagatggcggcgttcagc
gcggcggcccatccgctgaccgccgcgctctccctcgtctccggcggaacccacgcctga
DBGET
integrated database retrieval system
