Frankia casuarinae: Francci3_4258
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Entry
Francci3_4258 CDS
T00320
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
fra
Frankia casuarinae
Brite
KEGG Orthology (KO) [BR:
fra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fra03400
]
Francci3_4258
DNA repair and recombination proteins [BR:
fra03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Francci3_4258
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA
AAA_22
AAA_16
DUF7125
AAA_19
AAA_24
NTPase_1
nSTAND3
ABC_tran
AAA_29
AAA_18
AAA_5
RsgA_GTPase
AAA_30
NACHT
cobW
MMR_HSR1
RecA
DAP3
PAXNEB
Motif
Other DBs
NCBI-ProteinID:
ABD13604
UniProt:
Q2J538
LinkDB
All DBs
Position
5079510..5080967
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AA seq
485 aa
AA seq
DB search
MSDQRTNVASMASTRPSAGGRPSSRAASGGFRCNSCGSESVRWAGRCSRCQEWGTLEAQA
PAPRRGAGLVAGGRSASSAAVTAPALPVMSVDVTATRRRPTGIDELDRVLGGGLVPGAVI
LLAGEPGVGKSTLLLEVAARSAAAGARALVVTGEESAAQVRLRAGRTGALHEDLWIAAET
DLGAVLRHVEEVSPALLVVDSVQTISAAGVDGAAGGVTQVREVTAALIRTAKALGLVTVL
VGHVTKDGLVAGPRLLEHLVDVVLHFEGERHSALRLVRAGKNRYGPADEVGCFEMDDSGI
HGIADPSGLFLSRSSGAGLEAVPGTCVTVTVEGRRPLVAEVQALVAETSAQIPRRAVSGL
DPARVAMILAVVERRAKVRFGRADVYAATVGGVRLAEPAADLATALAIVSAARDRPLPAD
LVAIGEVGLAGEVRAVGSVRQRLAAAARLGFRRALVPADPGPAPDGMKVTEVPDLIGAIS
KMHET
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaccagcggactaacgttgcgtccatggcatccactcgcccgtcggccggcggt
cgcccgtcgagtcgtgcggcctcaggcgggttccggtgtaacagctgcggctcggagtcc
gtgcggtgggcgggacgatgctcgcgctgccaggagtggggcacgctggaggcccaggcc
cccgccccacgccggggggccggcctggtcgcggggggtcgttccgcctcgtccgccgca
gtgacggcaccggctctgccggtcatgtccgttgacgtgaccgcgacgcggcgtcgtccg
accgggatcgacgaactcgaccgcgtgctgggcggcggcctcgttcccggcgccgtgatc
ctgctcgccggggaaccgggggtcggcaagtccaccctattactggaggtcgcggcccgc
agcgccgccgccggtgcccgcgccctggtcgtcaccggggaggaatccgcggcgcaggtc
aggctgcgggcgggtcggacgggtgcgctgcacgaggacctgtggatcgccgccgagacg
gacctcggcgccgtcctgcgtcacgtcgaggaggtctcaccggccctgctggtggtcgat
tcggtgcagaccatctccgcggccggggtggacggagccgcgggcggggtcacccaggtc
cgtgaggtcaccgcggccctgatccggacggccaaggcgctgggactcgtgacggtgctt
gtcggccatgtcacgaaggatggcctggtcgccggaccacgcctcctggaacatctggtc
gacgtggtgctgcacttcgagggcgagcggcactccgcactgcgcctggtccgcgcgggc
aagaatcggtacggaccagccgacgaggtcggctgtttcgagatggacgattccggtatc
catggcatcgccgacccgagcgggctgttcctgtcccggtccagcggcgcggggctggag
gcggtgccgggaacctgtgtcaccgtaacggttgagggccgacggccactcgtcgccgag
gttcaggccctggtggcggaaacctcggcgcagatcccccggcgcgccgtgtccgggctc
gatccggcccgggtggcgatgattctcgccgtggtcgagcgccgggcgaaggtgcgcttc
ggccgggccgacgtgtacgccgcgaccgtcggcggggttcggttggccgagcccgcggcg
gacctcgcgacggccttggcgatcgtcagcgcggccagggaccgtccgttgccggccgat
ctcgtcgccatcggcgaggtcggcctggccggggaggtccgcgcggtgggctcggtacgc
caacggctcgccgccgcggcccggctcggctttcgccgggcgctcgttccggcggacccc
ggcccggctccggacggcatgaaagtcaccgaggtacccgacctgatcggcgcgatcagc
aaaatgcatgaaacatag
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