KEGG   Fretibacter rubidus: AB6B37_04875
Entry
AB6B37_04875      CDS       T10733                                 
Name
(GenBank) sigma-54-dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
frb  Fretibacter rubidus
Pathway
frb02020  Two-component system
Brite
KEGG Orthology (KO) [BR:frb00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    AB6B37_04875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:frb02022]
    AB6B37_04875
Two-component system [BR:frb02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   AB6B37_04875
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 Mg_chelatase AAA_16 nSTAND3 AAA_19 AAA VpsR PDE8A_N AAA_2 AAA_22 AAA_18 AAA_29 FleQ
Other DBs
NCBI-ProteinID: XER21943
LinkDB
Position
1024110..1025492
AA seq 460 aa
MKNDILIVEDEDDIRDMIAGILSDEGYQVRQAATSEAALEKIKARVPNLVVLDVWLKGSS
MDGIELLDRLKVNSPNLPVIIISGHGTVETAVSAIRKGAFDYIVKPFKAEKLLVTATRAL
ENARLRQENEELKGRAQGDDTLIGNSPYIMQLRQKITRIAPTNSRVLITGPSGSGKELIA
RHLHANSDRASGPFKAVNAASMVPERVEEELFGSTSDDGQTKTGLLEKAHNGTLYLDEVA
DMPLETQGKLLRLLIEQRFQRLGDSDDVQVDVRVITSTSRDLEKEARLGRFREDLYHRLN
VMPLEAAPLAARREDIPDLVKYFIERLASSTGLPARQIGDDAMAALQAHDWPGNVRQLRN
NVERLLILATGDPTQAITLQTLPPEVSVVRGSGAPQSDEKIIAMPLRDAREHFEREYLQA
QIERFGGNISRTASFVGMERSALHRKLKSLGVNANGRDAE
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgaagaacgatattttaatcgtcgaagatgaagacgatattcgggatatgattgcaggg
atactttctgatgaaggctatcaggtccgccaagccgcaaccagtgaggcggcgctagag
aagataaaagcccgcgtgcccaatcttgtcgtgcttgacgtctggctaaagggtagctcg
atggacgggatagaactgcttgaccgcttgaaggtcaatagtcccaaccttcccgtgatt
atcatcagtggtcacggcacggttgaaacggcggtttcggccattcgtaagggggctttt
gattatattgttaaaccgttcaaggctgaaaaactgctggtcactgcgactcgcgcactg
gaaaatgcgcgtctgcggcaggaaaatgaagaactaaaaggccgcgcccagggtgatgat
acgctgattggtaattccccctatatcatgcaattgcgccagaaaatcactcgaatagcc
ccaaccaatagccgcgtgttaatcacagggcccagtggttctggcaaagaattgattgcg
cgccatctccatgctaattctgaccgcgcaagcgggccgtttaaggcggtcaatgccgcc
tctatggtgcctgaacgtgtggaagaggagctgtttggctcgacctctgatgacggtcaa
accaaaacaggactgctagagaaagcccataacggcacgctttatttggacgaggtggcg
gatatgccgctggaaactcaaggcaagcttctgcggcttttgatcgaacagcgctttcag
cgcttgggtgacagcgacgatgtgcaagttgatgtgcgcgttataacgtccacttcgcgc
gacttggaaaaagaagcgcgtctgggacgctttcgcgaagatctttatcaccgcctgaac
gttatgccgctagaggccgcaccgctggcggcccggcgcgaggatattccggatctggtc
aaatattttattgagcggctggccagttcaaccgggttaccagcgcgtcaaattggcgat
gacgcaatggcggcgctgcaagcgcatgactggcccggaaatgtgcgccagcttagaaat
aatgttgaacggttgctcatcctcgccacgggtgatccgacgcaggcgattacgctgcaa
actctaccgcccgaagtgtcggttgtgcgcggatcaggggcgccgcaatcggacgagaaa
atcattgccatgccgctgcgcgacgcgcgggagcactttgaacgtgaatatctacaagcc
caaattgaacgttttggcggcaacatctctcgcacggccagttttgttggtatggagcgc
tctgcgctgcatagaaagctaaaatcgctcggcgtaaacgcgaacggccgcgacgcagag
taa

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