Fretibacter rubidus: AB6B37_05210
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Entry
AB6B37_05210 CDS
T10733
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
frb Fretibacter rubidus
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
frb03021
]
AB6B37_05210 (rpoH)
Transcription machinery [BR:
frb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AB6B37_05210 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_3
Snapin_Pallidin
GvpK
Motif
Other DBs
NCBI-ProteinID:
XER21945
LinkDB
All DBs
Position
complement(1088185..1089066)
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AA seq
293 aa
AA seq
DB search
MSLSVALNPEQGLNRYLSEIRKFPMLEKDEEFRLAKNWVEHGDTEAAEKMVTSHLRLVAK
IAMGYRGYGLPIGEVISEGNVGLMQAVKKFDPDKGFRLSTYAMWWIRAAIQEYVLRSWSL
VKMGTTAAQKKLFFNLRRMKGEMKALEDGDLKPEHLEQIATKLNVKEKEVNDMNRRMSYG
GDSSLNVTIGSEDGSSEWQDWLEDDTDSQEHTLGESQEYDARMELLGDAMADLNEREQHI
IRERRLSDSPKTLEELAVIYGVSRERIRQIEARAFEKLQEAMLKAAEPALIEG
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgtctgtggcgctaaaccctgaacagggcttaaatcgctatctctctgaaatt
cgcaaatttccgatgctggagaaggacgaagaatttcgtctggccaaaaattgggtcgag
cacggcgatactgaagcggctgagaaaatggtcacctcacacctgcgtctcgtcgctaaa
atcgctatgggctaccgtggctacggcctgcccattggcgaggttatctccgaaggcaat
gttggcctgatgcaagcggtaaagaaatttgaccctgataagggcttccgcctgtccaca
tatgcgatgtggtggattcgcgcggctattcaggaatatgtgctgcggtcttggtccctc
gttaaaatgggcacaacggcggcacaaaagaagctgtttttcaacctgcgccgcatgaag
ggcgaaatgaaggcattggaagacggcgacctaaagccagagcacctcgagcagatcgcg
acaaagctgaacgtcaaagaaaaagaagtgaacgatatgaaccgccgtatgagttacggc
ggggacagctcgcttaacgtcacaatcgggtcagaagacggcagttccgaatggcaagac
tggttagaagacgataccgacagccaagagcatacgctaggcgagagccaagagtatgac
gcgcgcatggaattgctaggcgacgctatggcggaccttaatgagcgtgagcagcatatc
attcgcgagcgccgcctatccgatagccccaaaacgctcgaagaactggctgtgatttac
ggcgtgagtcgcgaacgtattcgccagattgaagcccgcgcctttgaaaaactacaagag
gcgatgttaaaggcggcagagcctgcgcttattgagggttaa
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