Fretibacter rubidus: AB6B37_07840
Help
Entry
AB6B37_07840 CDS
T10733
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
frb Fretibacter rubidus
Pathway
frb00550
Peptidoglycan biosynthesis
frb01100
Metabolic pathways
frb01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB6B37_07840 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
AB6B37_07840 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
frb01011
]
AB6B37_07840 (mrdA)
Enzymes [BR:
frb01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
AB6B37_07840 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
frb01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
AB6B37_07840 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Lum_binding
Motif
Other DBs
NCBI-ProteinID:
XER21864
LinkDB
All DBs
Position
complement(1656467..1658311)
Genome browser
AA seq
614 aa
AA seq
DB search
MSDDRIDPSLITRRTAFLGVAGALGMSALTARLYYLQVVKAEDYTVLSDRNRFNFKTLIP
ERGRILDRNGVSLAVNRQDFQVMIVPEQVDDVDGTLDAISDIVPITDKVRARVKREAKRR
ARFIPVLVDSHLDWDAFAALNLRTPDLPGVALDVGQGRLYPHKGLFTHTLGYVGTAGPDD
IAVDKDPLLRQPSFRIGKTGVEAASDKTLRGKAGRLKVEVNARGRVVREWPDPKEKPVSG
DDVWLTLDADLQRHAADLFEEDSGGIAVIDVMTGELRTLLSMPTFDGNLFVSGLTAADMA
AMNASEKRPQFNKVIGGGYPPASTFKMVVMLAGLKEGLIDPKEKIFCTGRVRLGNRNFHC
WKRRGHGPMDLRDSLKQSCDVYYYEIANRLGIDPIHDMARRLGFGERFDIGISGQTSGIV
PNDAWKQARLGDGWRTGDSYNAAIGQGFVLTTPLQMAVMTARLANGRRAVNPTLIIGQDL
DGFDALDIDPTHLQLVRDAMWSVCEEPGGTAYRADSLGFGGIDMAGKTGTGQVRSISRAE
RESGVRSNERIAWELRDHSVFVGYAPFEAPRFAVATLVEHGGSGAGRAADISRQLLSMAL
SRDGVKPLSPEARL
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
gtgagtgatgaccgtattgacccatccttaattacccgccgcacagcgtttctaggcgtg
gcgggggcgcttggcatgagcgctctaacggcgcggctctattatctgcaagtcgttaag
gcagaagactacacagttctttctgaccgcaaccggtttaattttaaaacacttatccct
gaacgcggccgcatattagaccgtaacggtgtcagcctcgcggtgaaccgccaagatttc
caagttatgatcgtgcctgaacaagttgacgatgttgacggcacgcttgatgctatttcc
gatattgtcccgataacggataaggttcgtgcgcgcgtgaaacgcgaagcaaaacgccgc
gcgcggtttattcctgtgttggttgatagtcatttggattgggacgccttcgctgcgctt
aatcttcgcacacccgacttgccgggtgttgcactggatgttgggcaggggcgcctctat
cctcacaaggggttattcactcatacgttgggctatgtcggcacagcggggccagacgat
attgctgttgataaggatcccttactgcgtcaaccgtcttttcgaattggcaaaacaggg
gtcgaggcggcgtctgataaaaccctgcgaggtaaagcggggcgattaaaggtcgaagtc
aatgcccgtggccgtgttgtgcgcgaatggccagacccaaaggaaaagcccgtttcgggt
gacgatgtctggttaacactggacgcggatttacagcgtcatgccgcagacctatttgaa
gaggatagcggcggcattgcggtcattgacgttatgacaggcgaactgcgcacgctttta
tctatgccaacatttgacggtaatttattcgtctcaggtctgacggcggccgatatggca
gcgatgaatgcgagcgagaaacgcccgcagtttaacaaagtcattggcggcggttatccg
cccgcatcgacttttaaaatggtggtgatgcttgctgggctaaaggaaggtcttattgat
cccaaagagaagatattctgtacgggtcgtgtgcgcttaggtaaccgcaattttcactgt
tggaaacgccggggtcacgggccaatggatttacgcgattcattgaaacaaagctgcgat
gtttattattacgaaattgccaatcgcctgggtattgaccctattcatgatatggcgcga
cgtttgggtttcggcgagcgttttgatattggtatctctgggcaaacatcgggtattgtg
cccaatgatgcatggaaacaggcgcggcttggtgacggctggcgaacaggcgatagctat
aatgcggccattggacaggggtttgttttgacaacaccgctgcaaatggctgttatgaca
gcgcggctggccaatgggcgtcgggctgtaaatcccacattgattattggccaagattta
gacgggtttgacgcgttggatattgaccccacccatttgcaattggtgcgcgacgctatg
tggtcggtctgcgaagagccgggcggtacggcctaccgcgcagatagtctcggctttggg
ggcattgatatggccggcaaaacgggcacaggccaagtacgcagcatttcacgggccgaa
cgcgaaagcggagttcggtcaaatgaacgcattgcgtgggaattacgtgaccattccgtc
tttgttggatacgcgccatttgaagcgccgcgttttgcggtcgccacactcgttgaacac
ggcggatctggggcagggcgcgctgctgatattagccgccaactcctatctatggctctc
tcacgcgacggggtgaaaccattatcgcccgaggctcgattatga
DBGET
integrated database retrieval system
