Fretibacter rubidus: AB6B37_09105
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Entry
AB6B37_09105 CDS
T10733
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
frb Fretibacter rubidus
Pathway
frb00470
D-Amino acid metabolism
frb00550
Peptidoglycan biosynthesis
frb01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB6B37_09105 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AB6B37_09105 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
frb01011
]
AB6B37_09105 (murD)
Enzymes [BR:
frb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AB6B37_09105 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
frb01011
]
Precursor biosynthesis
Amino acid ligase
AB6B37_09105 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
NAD_binding_2
TrkA_N
AlaDh_PNT_C
AdoHcyase_NAD
Motif
Other DBs
NCBI-ProteinID:
XER19075
LinkDB
All DBs
Position
complement(1953112..1954572)
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AA seq
486 aa
AA seq
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MIKAATFKGQDVAVFGLGRTGLTAAKSLAAGGARVHAWDDRDAAREQAASEGVTLTDLTK
ADWSDFSALVLSPGVPHKLPKPHWTAQRAEASDTPIICDIEIFAREIAARAPDNRPKIIA
ITGTNGKSTTTTLIGHILERCNRAVQIGGNIGRGVLDLDRMHAGMIYVLELSSYQLERAP
SLHADVAVFLNLSPDHLDRHGDMAGYEAAKLNIFNNQTDKDTAVIGVDDPTGKRVCTMMK
AKNGRRIVPISGRKSLAHGATVIKGKLYCAVGRSVTEVADLTRAQTLEGTHNWQNAAAAY
AAVQALGLKAKEIGPAILSFPGLAHRMESVGMVGPVRYVNDSKATNGDAARQALAAYENI
YWIAGGVAKKGGIEGLSDLFSNVTRAYLIGEAGEAFAKTLKTNKVSCKVSDYLETAIICA
TKDALASKKPNPIILLSPACASFDQFKDFESRGDVFRSKSGDIIALFQREINAAQLKSKS
NDTSAA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaggcagcaacattcaaagggcaagacgtcgccgtatttggccttggccggacg
ggattaacggcagcgaaatcgctcgccgctggcggtgcgcgtgttcatgcctgggatgac
cgcgatgctgcccgcgaacaagcggccagtgaaggtgtgaccttgacggatttaacgaaa
gcggattggtctgatttttctgccctcgttctgtcccccggtgtgccgcataaactgcca
aagccgcattggacagcccagcgggccgaggcgtcagacacgcccatcatctgtgacatt
gaaatttttgcccgcgagattgcggcgcgcgcgccagataaccgccccaaaattatcgcc
attacaggcacaaatggcaaaagcaccacgacgactttaatcggtcatatcttggaacgt
tgtaaccgtgcggttcaaattggcggcaatatcggtcgcggcgttttagacttggaccgt
atgcatgcgggcatgatttatgttttggagctatcgtcttatcaacttgaacgcgcgccg
agccttcatgctgatgtcgcggtatttctaaatctttcgcctgatcatctggaccgtcac
ggcgatatggcgggctatgaagcggctaagctgaatatctttaacaatcaaacagacaaa
gacacggccgtgattggtgtggatgacccaacgggcaagcgcgtttgcaccatgatgaaa
gctaaaaatggccgccgtattgtgcctatttctggtcgcaagtcgctcgcacatggtgcc
acggttataaaaggaaagctgtactgcgccgttggccgcagcgtcacagaagtcgccgat
ttgacacgcgcgcagacattggaaggcactcataactggcaaaatgccgccgcagcatac
gccgccgttcaggctttggggctgaaagctaaagagattggtcctgcaatcctgtccttc
ccgggtcttgcgcaccgtatggagtccgtcggaatggtcggccctgtgcgctatgtaaac
gacagcaaggcgaccaacggcgacgcagcgcggcaagccttggccgcctatgagaatata
tactggattgcgggtggcgttgcgaagaagggcggcattgaagggctgtctgatctcttt
agcaacgtcacccgtgcttaccttatcggcgaagcgggggaggcatttgcgaaaacgctg
aagacgaataaggtcagttgcaaagtgtctgattatctagagacggccattatttgcgcg
accaaagatgcgctagcgtcaaaaaaacctaacccaattatccttttgtcccctgcctgt
gcaagttttgatcagttcaaagatttcgagtcgcgcggtgatgttttccgtagcaaatca
ggtgacataattgccctgtttcagcgcgaaattaacgctgcgcaattaaagtctaagtcg
aatgacacgagcgcggcatga
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