Fretibacter rubidus: AB6B37_09355
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Entry
AB6B37_09355 CDS
T10733
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
frb Fretibacter rubidus
Pathway
frb03420
Nucleotide excision repair
frb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AB6B37_09355
03430 Mismatch repair
AB6B37_09355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frb03400
]
AB6B37_09355
Enzymes [BR:
frb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AB6B37_09355
DNA repair and recombination proteins [BR:
frb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AB6B37_09355
MMR (mismatch excision repair)
Other MMR factors
AB6B37_09355
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
Metallophos_C
DUF3638
Motif
Other DBs
NCBI-ProteinID:
XER19123
UniProt:
A0ACH2QRY9
LinkDB
All DBs
Position
2007782..2010097
Genome browser
AA seq
771 aa
AA seq
DB search
MARGPAGQNTGDSSAYLEGLNPEQRDAVLSTEGPLLVLAGAGTGKTRVLTCRLAHILNQG
QAYPSQILSVTFTNKAAREMKERVGDLVGGAVEGMPWMGTFHSIAAKILRIHAELVDLKS
SFTILDTDDQIRLLKQIIKAHNIDEKRWTARYLANLIDSWKNKGLLPDKISAGDSHSFAD
GKGRELYKAYQTRLTQLNACDFGDLLLHNLTIFQNYPDILKKYNSKFRYMLVDEYQDTNV
CQYLWLRLLAQNSGGSSNICVVGDDDQSIYGWRGAEVDNILRFEKDFPGAKVVKLERNYR
STEHILGAASGLIRANQDRLGKTLWTEDKGGNKVSVMGVWDAPAEARIIAGEIENWKSNG
RRYSEVAILVRASRQMRSFEERFITLGLPYKVIGGPRFFERAEIRDAHAYLRVLKSDTDD
LAFERIVNTPKRGIGNTTIQKLQLAARAMGVSLETAVRELTKTDEIRGKARTSLKAFILD
VDRWRKEAETLPHTDIAERILDESGYTQMWKDSKDAKSAGRLENLKELIQAMSEFPTLDA
YLEHVSLVLDVDSGPKEDEVSLMTLHSAKGLEFPLVFLPGMEEGIFPSQKSMDENGLAGL
EEERRLAYVGITRAREQAKIYFAANRQVYGSWQSSIPSRFIDELPPQHVEVESETGYFEQ
AGRKQSSDYVMEAASRFADSFEAAKSQRTSPGWQRYQENRNKNFGRAPKEIEGHAVKRPA
ANKSSNFKVGERIFHQKFGYGTVTETNGTKLSVSFEKAGDKMVLDSFVERT
NT seq
2316 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtggccccgccggtcaaaacaccggcgatagcagcgcttatttagaaggtctg
aaccccgaacaacgtgacgccgtgctctccactgaagggccgcttttggtgctggcgggc
gcgggtacgggcaagacacgggtgctgacctgccgcctcgcgcatattttaaaccaaggt
caggcctatcccagccaaattctgtcggtgacctttaccaataaagcagcgcgggaaatg
aaagaacgagttggcgatcttgtcggcggcgcagtagaaggcatgccgtggatgggcacg
tttcactctattgccgcgaaaatcctgcgcattcatgccgaacttgtcgatcttaaatcc
agcttcacaatccttgatacagatgaccaaatccgcctgttaaagcaaatcatcaaggcc
cataatattgacgagaaacgctggaccgcgcgttacctcgcaaacctaattgacagctgg
aaaaacaaaggcctgttgcccgataaaatcagcgcaggtgatagccacagctttgccgac
ggcaagggacgtgaattatacaaagcctatcagacccgcctcacccagcttaatgcttgt
gattttggtgatttgctgctgcataacctgacgatatttcaaaactaccctgatattttg
aagaaatataatagcaagtttcgctatatgttggtggatgagtatcaagatactaacgtc
tgccaatatctctggctgcggctgcttgcgcaaaatagcggcgggtcgagcaatatctgt
gtcgtcggtgacgacgatcaatccatatacgggtggcgcggggcagaagtagacaacatc
ctgcggtttgaaaaagacttccccggcgcaaaggtcgtcaagctggaacgcaattaccgc
tcgactgagcatatcctcggtgcggcgtctggcctgatccgggcgaaccaagaccgcctt
ggcaagacattatggaccgaagataaaggcgggaacaaagtctctgtcatgggcgtttgg
gacgcccccgccgaggcgcgcatcattgcgggcgaaattgaaaattggaaatcaaacgga
cgacgttattccgaagttgccatcctcgtgcgggcatcgcggcaaatgcgcagctttgag
gaacgctttatcacgcttggcttgccttataaggtcattggcggcccgcgctttttcgaa
cgtgccgagattcgcgatgcccatgcatatttgcgcgttttaaaatccgacacagatgat
ctggcgtttgaacgtatcgtcaacacgcccaagcgcggcattggcaatacaaccattcaa
aagctgcaactcgccgcgcgcgctatgggggttagcctagagacggctgtgcgtgaactc
acgaagaccgacgaaattcgcggcaaagcccggacatcgctcaaagcctttattttggac
gtggaccgttggcgcaaagaggcagagaccctgccccataccgatattgctgagcgcatt
ttagacgagtctggctacacccaaatgtggaaagacagcaaagacgccaaatccgcagga
cggcttgagaacctaaaagaacttatccaagcgatgtctgagtttccaacgcttgacgcc
tatttggaacatgtcagcctcgtgctggacgttgacagcgggccgaaagaagacgaggtc
agcctgatgacccttcattctgccaaggggctagagtttccgctggtcttcctgcccggt
atggaagaaggcattttcccaagccaaaaaagcatggatgaaaacggccttgcgggattg
gaagaagaacggcgtctggcctatgtcggcatcacgcgcgcgcgcgaacaggccaagatt
tactttgccgccaatcgccaagtttacggctcatggcaatcctctatcccgtcgcgtttc
atcgatgaattaccgccgcagcatgtcgaggtcgaatccgagacaggttatttcgagcaa
gcggggcgcaagcaatcatccgattatgtcatggaagccgcttcgcgtttcgccgatagt
tttgaagccgcgaaatcccagcgcacatcacctggctggcaacgttaccaagaaaaccgg
aataagaactttggccgcgcgcccaaagaaattgagggccatgcggtcaaacgcccagcg
gccaataaatcttctaatttcaaagtcggcgagcggatttttcaccaaaaatttggctat
ggcacggtgacagaaaccaacggaaccaagctatcggttagctttgaaaaggcgggcgat
aaaatggtgctcgatagttttgtcgaacggacctaa
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