KEGG   Fretibacter rubidus: AB6B37_13640
Entry
AB6B37_13640      CDS       T10733                                 
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
  KO
K01778  diaminopimelate epimerase [EC:5.1.1.7]
Organism
frb  Fretibacter rubidus
Pathway
frb00300  Lysine biosynthesis
frb00470  D-Amino acid metabolism
frb01100  Metabolic pathways
frb01110  Biosynthesis of secondary metabolites
frb01120  Microbial metabolism in diverse environments
frb01230  Biosynthesis of amino acids
Module
frb_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:frb00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    AB6B37_13640 (dapF)
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    AB6B37_13640 (dapF)
Enzymes [BR:frb01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.1  Acting on amino acids and derivatives
    5.1.1.7  diaminopimelate epimerase
     AB6B37_13640 (dapF)
SSDB
Motif
Pfam: DAP_epimerase PhzC-PhzF
Other DBs
NCBI-ProteinID: XER19953
LinkDB
Position
2945616..2946455
AA seq 279 aa
MRFLIMNGAKNRFAVFDARANSGFAMDEAKAITICKPGSAVMGEKGADQLVIMRARKDPH
ADAFMEIWNQKGFEVDACGNATRCIAWLYMQEAGVDTMTLETNAGLLYCRAAGENRVAVD
MGPPRLDWSEIPLEEPMHTHHIDVKVGPIDAPMLSNPGAVNMGNPHCVFFVDDFIKAKPE
RVGPMIEFHPLFPQQVNVGFARVDAPDRIRLKVWERGVGMTLACGTGACAAVVAAHRQKR
SGRKVMVEVDGGELLIEWRASDDHVIMTGPIEVEMEGVI
NT seq 840 nt   +upstreamnt  +downstreamnt
atgcgctttttaattatgaacggagcgaagaaccgctttgccgtctttgacgcgcgggca
aattctggctttgccatggatgaggccaaggctatcaccatttgcaaaccgggcagtgcc
gtcatgggcgaaaagggcgcagaccagcttgtgattatgcgcgcgcgaaaagacccccat
gccgacgcctttatggagatttggaatcaaaaagggtttgaggtcgacgcctgtggtaat
gccacgcgctgtattgcgtggctctacatgcaagaggcgggcgtggacacaatgacgctg
gaaaccaatgcggggctgctttattgccgcgcagcgggcgagaacagggtcgccgttgat
atggggccaccgcgccttgattggagcgaaatcccgctggaagaacccatgcatacccac
catatcgacgtcaaagtcggcccgattgatgcgcccatgctgtccaaccctggtgcggtc
aatatgggtaatccgcattgcgtctttttcgtggatgactttatcaaagccaagcccgaa
cgtgttgggccgatgattgaatttcatccgctgttcccgcaacaagtcaatgtcggtttt
gcccgcgttgatgcccctgaccgtatccgcctgaaagtgtgggaacgcggtgtgggcatg
acgctagcttgcggcacaggggcctgcgcggccgtagttgccgcccaccgccaaaaacgc
agcgggcgcaaagttatggtcgaagtggacggcggggagctgctgattgaatggcgcgcc
tctgatgatcacgtcattatgacaggcccaatagaggtcgagatggagggggtgatttaa

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