Fretibacter rubidus: AB6B37_13640
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Entry
AB6B37_13640 CDS
T10733
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
frb Fretibacter rubidus
Pathway
frb00300
Lysine biosynthesis
frb00470
D-Amino acid metabolism
frb01100
Metabolic pathways
frb01110
Biosynthesis of secondary metabolites
frb01120
Microbial metabolism in diverse environments
frb01230
Biosynthesis of amino acids
Module
frb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AB6B37_13640 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AB6B37_13640 (dapF)
Enzymes [BR:
frb01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
AB6B37_13640 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
XER19953
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Position
2945616..2946455
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AA seq
279 aa
AA seq
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MRFLIMNGAKNRFAVFDARANSGFAMDEAKAITICKPGSAVMGEKGADQLVIMRARKDPH
ADAFMEIWNQKGFEVDACGNATRCIAWLYMQEAGVDTMTLETNAGLLYCRAAGENRVAVD
MGPPRLDWSEIPLEEPMHTHHIDVKVGPIDAPMLSNPGAVNMGNPHCVFFVDDFIKAKPE
RVGPMIEFHPLFPQQVNVGFARVDAPDRIRLKVWERGVGMTLACGTGACAAVVAAHRQKR
SGRKVMVEVDGGELLIEWRASDDHVIMTGPIEVEMEGVI
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcgctttttaattatgaacggagcgaagaaccgctttgccgtctttgacgcgcgggca
aattctggctttgccatggatgaggccaaggctatcaccatttgcaaaccgggcagtgcc
gtcatgggcgaaaagggcgcagaccagcttgtgattatgcgcgcgcgaaaagacccccat
gccgacgcctttatggagatttggaatcaaaaagggtttgaggtcgacgcctgtggtaat
gccacgcgctgtattgcgtggctctacatgcaagaggcgggcgtggacacaatgacgctg
gaaaccaatgcggggctgctttattgccgcgcagcgggcgagaacagggtcgccgttgat
atggggccaccgcgccttgattggagcgaaatcccgctggaagaacccatgcatacccac
catatcgacgtcaaagtcggcccgattgatgcgcccatgctgtccaaccctggtgcggtc
aatatgggtaatccgcattgcgtctttttcgtggatgactttatcaaagccaagcccgaa
cgtgttgggccgatgattgaatttcatccgctgttcccgcaacaagtcaatgtcggtttt
gcccgcgttgatgcccctgaccgtatccgcctgaaagtgtgggaacgcggtgtgggcatg
acgctagcttgcggcacaggggcctgcgcggccgtagttgccgcccaccgccaaaaacgc
agcgggcgcaaagttatggtcgaagtggacggcggggagctgctgattgaatggcgcgcc
tctgatgatcacgtcattatgacaggcccaatagaggtcgagatggagggggtgatttaa
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