Fretibacter rubidus: AB6B37_13950
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Entry
AB6B37_13950 CDS
T10733
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
frb Fretibacter rubidus
Pathway
frb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
frb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AB6B37_13950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frb03400
]
AB6B37_13950
Enzymes [BR:
frb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AB6B37_13950
DNA repair and recombination proteins [BR:
frb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AB6B37_13950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LTI65_PGEED
Motif
Other DBs
NCBI-ProteinID:
XER20014
LinkDB
All DBs
Position
complement(3009152..3009988)
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AA seq
278 aa
AA seq
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MDIKLASWNINSVRLRIDQVIRFLDEEKPDVLGLQEIKCETDKFPYEPFREAGYNYIEVA
GMKGYHGAATVSKLPMERLPTSFCPLDHARHVSTRVVAGDMSKGGMDFEFHNFYIPAGGD
EADRTVNDKFGHKLDFIDNMKGYFTERFAKGDDQQVLVGDFNIAPHENDVWNHKQLLKVV
SHTPLEVELLKTLQDTHDFTDTARLHRTDDEKIYSWWSYRAKDVFASNRGRRLDHIWVSP
ALHDAAVAAGRDGFKVHLDCRVWEKPSDHAPITQVLKL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaactcgcttcgtggaatattaattccgttcgtcttcgcattgaccaagtc
atccgttttctggatgaggaaaaacccgacgttttaggcttgcaggaaattaaatgcgag
actgataaatttccctatgaaccgttccgggaggcgggttataattatatcgaagtcgcg
ggtatgaagggctatcacggtgcggcaacggtatcaaaattaccgatggaacggctgccc
acatccttttgcccgctggatcacgcgcgtcatgtatctacccgtgttgttgcgggggac
atgtcgaaaggcggcatggattttgaatttcataatttctatataccggcgggcggtgac
gaggctgaccgaacagtgaatgataaatttggccataagcttgattttatcgataatatg
aaaggctacttcacagagcgctttgccaaaggtgacgaccagcaagtcttagttggggat
tttaatattgccccacatgaaaatgatgtttggaatcacaaacaactgttgaaagttgtg
tcccataccccgctcgaagtcgagttgttaaaaacgttgcaagacacccatgatttcact
gatacggcgcgactgcaccgtacagatgatgagaagatatatagttggtggagctaccgt
gccaaagatgtctttgcgtccaaccgcggacggcgtctggatcatatttgggtcagtcct
gcgctacacgacgcggcggttgcggcgggacgtgacgggttcaaagtgcatctggattgt
cgtgtctgggaaaagccgtctgaccacgcacccatcacccaagtgttaaagttatag
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