Fretibacter rubidus: AB6B37_14015
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Entry
AB6B37_14015 CDS
T10733
Name
(GenBank) sigma-54-dependent transcriptional regulator
Organism
frb Fretibacter rubidus
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
HTH_50
HTH_7
AAA_2
Mg_chelatase
RWP-RK
AAA_16
HTH_17
HTH_22
TadZ_N
HTH_23
TetR_N
IstB_IS21
HTH_Tnp_1
AAA_22
FleQ
HTH_IclR
Phage_CP76
HTH_28
APS_kinase
CENP-B_N
Motif
Other DBs
NCBI-ProteinID:
XER21989
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Position
3021318..3022778
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AA seq
486 aa
AA seq
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MAKTVLIVDDDPTQRRLLQAVVEKSGFSTYQAGDGDQALNMVLGADAANIDVMLLDLVMP
GRDGMEVLAELQVKRPDLPVIVLTGKGSIDAVVSAMQSGARDFVVKPASPERIIVSIRNA
LEINNLAVEVTRLKKTSDGALQFTDLIGNATTMRSVIAMGERGAKANIPILITGESGVGK
EVIARAIQGASERSGAPFITVNCGAIPENLVESILFGHEKGSFTGANSKHLGKFQEAHGG
TLFLDEVGELPLDMQVKLLRVLQEGEVDPIGSKRPVSVDVRIISATNRDLNDAVREGRFR
EDLYYRLNVFPIQVPSLRERRADIPALLTHFIKRFNAQERLSVQGAAKETLDMLSAFDWP
GNVRQLENAIFRAMILSDGTTLQPHDFPQISGLTPVMSTASEKDKTMGLSDQVKAAALSE
DEPVHVLDRDGHLRTLVEIERDLIEFAIDNYSGHMSEVARRLGIGRSTLYRKVREHGVDV
DVKRTA
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaacggttttaatcgttgatgacgatccgacacaaagacggcttttacaggcg
gtcgtagaaaaaagtggattttcaacctatcaagccggtgatggtgaccaagcgctaaac
atggtgcttggtgcggatgcggccaatatcgacgttatgctacttgaccttgttatgcca
ggacgcgacggcatggaggttctggcagaattacaagttaagcgtcctgacctgcccgtt
attgtgctgacaggtaaaggctctatcgatgccgtggtcagcgccatgcaatcaggcgcg
cgtgactttgttgtcaaacctgcaagccctgagcgtattatcgtatcaatccgcaatgcg
ctagagattaacaatctggccgtcgaagtgacgcggttaaagaaaaccagtgacggcgcg
ctgcaatttaccgaccttattggtaatgcaacgaccatgcgcagtgttatcgccatgggt
gagcgcggcgcaaaagccaatatccctatcctgatcacaggcgagtcgggcgttggtaaa
gaagtcattgcacgcgccatccaaggcgcgtcagagcgttctggtgccccgtttattacg
gtaaactgcggcgcaatcccagaaaatctggttgagagtattttgtttggccatgaaaaa
ggcagctttacaggtgccaattccaagcatttaggtaagttccaagaagcccatggcggc
acattatttctagacgaagtcggggaattgcccctggatatgcaggtcaaattactgcgc
gtgctacaagaaggcgaagtcgatccgattggatcaaagcgtcctgtatctgtggatgtg
cggattatttcggcaacaaaccgtgacctcaatgacgccgtgcgcgaagggcgctttcgc
gaagatctatattaccgtctgaacgtctttccaatccaagtgccgtctttgcgtgaacgc
cgcgcggatattccggcgctgctaacccattttatcaaacgctttaacgcgcaagaacgc
ttgtctgtgcagggtgcggccaaagaaacgctggatatgttatccgcttttgattggccc
ggtaatgtgcgccaactggagaatgcgattttccgcgccatgattttatcagacggcacc
acattacaaccgcatgattttccgcaaattagcgggctgacacccgttatgagtactgcg
tcagagaaagacaaaaccatgggtttgtcagaccaagtcaaagcggccgcactgagcgag
gatgaacccgttcacgtgctcgaccgtgatggtcacttgcgcacgctcgtcgaaattgaa
cgcgacctgattgaattcgcgattgataattattcaggacatatgtccgaagtggcccgc
cggttggggattgggcgctcaacactttaccgcaaagtgcgagagcacggcgtcgatgtt
gacgtgaaacgcacggcataa
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