Francisella frigiditurris: KX01_1045
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Entry
KX01_1045 CDS
T05636
Name
(GenBank) HRDC domain protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
frc
Francisella frigiditurris
Brite
KEGG Orthology (KO) [BR:
frc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
frc03016
]
KX01_1045
Enzymes [BR:
frc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KX01_1045
Transfer RNA biogenesis [BR:
frc03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KX01_1045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
AvrB_AvrC
Motif
Other DBs
NCBI-ProteinID:
APC97950
UniProt:
A0A1J0KWG3
LinkDB
All DBs
Position
complement(1048154..1049254)
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AA seq
366 aa
AA seq
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MIIKQQSQFDQLIERIKAHNQITIDTEFFWVRTYFPILCLIQVSIDDDVFLIDTLNKDIN
LTALTDVFEESNIQKIMHSAANDIPIIKHFLNCKVNNIFDTQVAANFLGYQNQVSLKTLL
EEALNISIEKEEQFSDWRKRPLSEQQIEYAINDVKHLYLLKNHLEEQLNNNQYVDYFYDE
MKNICNDSEFTNPNDAYLKAGNIQKYSAKTQRNIILLANWREATAQQKDIPIRFLFDNKD
LFTIAALNPKSLDDFKDHPLSRLKLNLKKQIIEVLNTKDDVSTLIKSKKNPIKLDEEFLE
RTISFFESEVDKYTINKTFIASKKNIRSLAYNLKLKNEFSNSKLLEGWRYKVVGKSLKEY
ILKHMV
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgataataaaacaacagagtcaatttgatcagcttatcgaaagaattaaagctcacaat
caaattactatagatactgaatttttttgggtaagaacgtatttcccaatactttgttta
attcaagtatctatcgatgatgatgtttttctaatagatactttaaataaagatatcaac
cttactgctttgacagatgtttttgaagaatcaaatatccaaaaaattatgcactccgct
gcaaatgatattccaattattaaacatttcttaaattgtaaagttaataacatttttgac
actcaagttgcagcaaattttctaggttatcagaatcaagtttctctaaaaaccttatta
gaagaagctttaaatatctctatcgaaaaagaagaacaattttctgattggagaaaaaga
cctctttctgaacaacaaattgaatatgctataaatgatgttaagcatctatatttatta
aaaaatcatttagaagaacaattaaacaataatcaatatgtagattatttctatgatgaa
atgaaaaatatttgtaatgattctgagtttacaaatccaaatgatgcatatttaaaagca
ggtaatatccaaaaatactcagcaaaaactcaaagaaatataatattacttgcaaattgg
cgtgaagcaacagcacaacagaaggatattcctattagatttttatttgataataaagac
ttattcactattgctgctcttaaccctaaaagccttgatgatttcaaagatcatccttta
tcaagattaaaactaaatttaaaaaaacaaataatagaagttcttaatactaaagatgat
gtttcaacattaataaaatctaaaaaaaatcctataaagcttgatgaagagtttttagaa
agaactatatctttctttgaatcagaggtggataaatatactatcaacaagacatttatt
gcatctaaaaaaaatattagatctttagcatataacctaaaattaaaaaatgaattttct
aatagcaaactattagagggttggcgttataaagtagttggaaaatctttaaaagagtat
atattaaagcacatggtctaa
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