Francisella frigiditurris: KX01_1366
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Entry
KX01_1366 CDS
T05636
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V, beta subunit
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
frc
Francisella frigiditurris
Pathway
frc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
frc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KX01_1366 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
frc03400
]
KX01_1366 (recB)
Enzymes [BR:
frc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KX01_1366 (recB)
DNA repair and recombination proteins [BR:
frc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KX01_1366 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_12
Motif
Other DBs
NCBI-ProteinID:
APC96870
UniProt:
A0A1J0KT96
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All DBs
Position
complement(1351961..1355446)
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AA seq
1161 aa
AA seq
DB search
MKNLDTKTIPLNGRHIIEASAGTGKTYNITELYVRLLLEKKLLPSQILVMTFTKDATQEI
IGRVESKLRDVIRNHKSGKEVLSEENYKYLKRALLEIDEAAIFTIHGFCKKVLSEQAFTS
GIEMDVSMEVDTSDILQKVVEDFFRNNINNNQENYEYLKAFKLHTPEKFLGRNGLWNVVK
SNYEILTSKEVFKNDIEHYKREIKVNITNGLNTEIDEYIDQKGFRQSFERVLMWLDSNDI
AIPKDAYLITKGNLKAIYKDLISISLKKMISLAEDYTEFKQTQFIQQSCSQIRKNFIKAK
EQKGVLDFNDLITKLCQSVQTSTDIVKTLQTQYPVALIDEFQDTDAEQYQILDTIYPTSK
EELMLLMIGDPKQAIYGFRGGDIFTYLKAKASCPAENHWSMDTNWRSTSQMIKAYNRLFY
KDDYEIDGAVGKDIFSEGIDYQTVKASPNADSKNKVFDDNFQPINYFYYDVAEDDNKNDI
DTKLSAWTANEIVRLLSSKKVTESDIAILVENGKQAKVIQQALQQKNLSSVYLSQRDNVY
KSQEAQEILFLMEGINELENKYLLKKALSTSLLGGSAEKFLAYFDEEKIEEWGRQIDYAK
GLRDKWHKYGFMSFIMQILHESFIQRTENKQRVITNVLHLAELIKVAENKYKHPNQLIKW
YRQQIKSDTDLEGELRLESNDNLIKIITIHGSKGLEYPIVFIPFASYVSSKKFLLDKVNK
YYDKELAQTVYKIGKDDSIKDIVDNEAVEELMRLFYVAVTRAEHRCYIGVAKYQSKKGAA
KIPSDDSYNSPLAQFVNYKKDEDWLEKVQKITNNPANQSLLLEINNFQSIEIQHTSYNVA
NQELKASQIHKLENDNWEMLSFSKISKSKPQNIILEKENDESEDDKAQEIQQKLEFRFTA
TKGADIGNILHNVLEHTDFSTGEIDDTLLQEQMNRYKVVAAEDFNNLKSWLEECLTAPIS
EIEQQSSLVQKESNFQGELFDDNKSVLHTSSFCLKDILNSKTLKEAEFYFPVTNKKLYKT
NIIKALGEYRGREIDYDKLSNQKVFGMLHGFIDLIFEYNGKYYVADYKSNYLGDSLEDYS
QEKMRQKNQDSFYDLQYLIYSVALHRYLSSNLPSYSFDKHFGGVYYFYLRGFKDGFGVYK
TKIERSTLEKMDSIFTGANDV
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctagatacaaaaacaatacctttaaatggtcgacacataatcgaagcaagt
gctggtactggtaagacttataatattacagagctatatgttaggcttttgcttgagaag
aaactattaccaagtcaaatattggtaatgacatttactaaagatgcaacacaagaaatt
attggtagagtcgagtctaagttaagagatgtaatcaggaatcacaaatcgggcaaagaa
gttttatcagaagaaaattataaatatcttaaaagagcattattagagattgatgaggct
gcaatttttactattcatggtttctgtaagaaggttttaagtgagcaagcttttactagt
ggtatagagatggatgtctcaatggaagttgatacatctgatattttgcaaaaagtggta
gaggatttttttaggaataatataaataataatcaagagaattatgagtatctaaaagcc
tttaaattgcataccccagagaagtttttaggcagaaatggtttatggaatgttgttaag
tctaactatgagattttaactagtaaagaagtttttaaaaatgatattgagcattataaa
agagaaattaaagtaaatataactaatggcttaaatactgaaatagacgaatatatcgat
caaaaaggttttaggcaaagttttgaaagagtcttaatgtggctagattctaatgatatt
gctattcctaaagatgcttacttgattactaaaggtaatttaaaagcaatatataaagat
cttatatcaatttctttaaaaaaaatgattagcttagcagaggattatacagagtttaag
caaactcaatttatccaacaatcatgttcacaaattcgtaaaaactttatcaaagctaaa
gaacagaaaggcgttttagattttaatgatctgattacaaagctatgtcaaagtgtacag
acctctactgacatagtgaaaactctacaaacacaatatcctgtagctcttatagatgag
tttcaagatacagatgctgagcaatatcaaatactagatacaatttatccgacatctaaa
gaagagctaatgttgctaatgataggtgatcctaagcaagctatctatggcttcagaggt
ggtgatatatttacatacctaaaagcgaaggctagttgtccagcagaaaatcactggagt
atggatactaactggcgctcaactagccaaatgataaaagcttataataggcttttttat
aaagatgattatgagattgatggtgctgttggtaaggatatttttagtgagggtattgat
tatcaaactgttaaggcatcgccaaatgcagatagtaaaaataaagtttttgatgataat
tttcagccaataaattacttctattatgatgtggcagaagatgataataaaaatgatatt
gataccaaattatcggcttggactgctaatgaaattgttagactactaagttctaaaaaa
gtaacagagagtgatattgcaatacttgttgagaatggtaaacaagcaaaggttatacaa
caggcattacaacaaaaaaatctaagttcagtttatctaagtcaaagagataatgtttat
aaaagccaagaggctcaagaaatcctatttttaatggaaggaataaatgagcttgagaat
aagtatttattaaagaaagctctatcaacaagcctgttaggtggaagtgctgaaaagttt
ttagcttattttgatgaagaaaaaatagaggagtggggtagacaaattgactatgcaaaa
gggctaagagataaatggcataaatatggttttatgtctttcattatgcagattttacat
gagagttttattcagcgaacagaaaataaacaaagagtaattacaaatgttttacattta
gcagagcttataaaagtagctgaaaataaatataaacatcccaatcagcttatcaaatgg
tatcgccaacagataaaaagtgatactgatttagagggtgagttaagattggaaagtaat
gataatttgataaaaataatcacaatccacggatcgaaggggcttgagtatcctattgta
tttataccatttgcaagttatgtaagtagtaagaagtttctgctagataaagtaaataaa
tactatgataaagaattagctcaaacagtttataagattggtaaagatgattctataaaa
gacattgttgataatgaagctgtagaagagcttatgagacttttctatgtggcagttact
cgtgctgaacatagatgctatattggagtggctaaataccaatctaaaaagggcgctgct
aaaattccaagtgatgactcatataatagtccattggcacaattcgtgaattataaaaaa
gatgaagactggctagagaaggttcaaaaaatcacaaacaatccagctaaccaaagtttg
cttttagagataaataattttcaaagcatagaaatacaacatactagctataatgtggca
aatcaagagctaaaagctagtcaaatacacaagctagaaaatgataattgggaaatgtta
tctttttctaaaatatctaagtcaaagcctcaaaatataatattagaaaaagaaaatgat
gagtcagaggatgataaagctcaagaaatacagcaaaagttagaatttagatttacagct
accaaaggagcagacattggtaatattttgcataatgttttggaacatacagattttagc
acaggtgaaatagatgatactcttttacaagagcaaatgaatagatataaggtagttgct
gcagaagattttaataatctaaaaagctggttggaagagtgtttaactgcaccaattagt
gaaatagagcaacaatcctctttagtgcaaaaagaaagtaattttcaaggcgaacttttt
gatgataataagagtgttttacatacgtctagcttttgcttaaaagacattctaaattca
aaaacattgaaagaagcagaattctacttcccagttacaaataagaagctttataaaacc
aatattataaaagctttaggagagtatagagggagagaaatagattacgataagcttagt
aatcagaaagtttttggtatgttgcatggttttatagatttaatatttgaatataacggt
aaatattatgttgcagattataagtctaattatttgggagattctttagaggattattct
caagaaaaaatgaggcagaaaaatcaggatagcttctacgatttgcaataccttatctat
agtgtggcactgcacagatacctttcaagtaatctaccaagctacagttttgataagcat
tttggtggagtttattatttttatcttagaggctttaaggatggttttggtgtttataaa
actaagatagagagaagtactttagaaaaaatggatagtatttttacaggagctaatgat
gtatag
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