Francisella frigiditurris: KX01_1435
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Entry
KX01_1435 CDS
T05636
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
frc
Francisella frigiditurris
Pathway
frc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
frc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KX01_1435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
frc03019
]
KX01_1435
03009 Ribosome biogenesis [BR:
frc03009
]
KX01_1435
Enzymes [BR:
frc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KX01_1435
Messenger RNA biogenesis [BR:
frc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KX01_1435
Ribosome biogenesis [BR:
frc03009
]
Prokaryotic type
rRNA helicases
KX01_1435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Utp25_C
AAA_30
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-ProteinID:
APC97168
UniProt:
A0A1J0KTR0
LinkDB
All DBs
Position
complement(1427534..1429225)
Genome browser
AA seq
563 aa
AA seq
DB search
MDSEIKKDFQSLGLNEDIISTVKSLGYENPTPIQQYAIPYVLSGRDVLGQAQTGTGKTAA
FALPLINNMDLSSNSRLPQVLVLAPTRELAIQVAEQFEAFSKRIPNLEVVSIYGGQEYGG
QIRALKEGVQVVVGTAGRVMDHIKKGTLKLEGLKTLVLDEADEMLRMGFIDDVKWVLSHI
DDSCQRLLFSATIPSDIANIIKEHLRNPCKIQVKSKTETANTITQKFIVIKGFKKIDALD
RILETEETDGVIIFVKTKTSTIEVADNLKALGYKVAAINGDMQQNQREYIIEQFKNGNSS
ILVATDVVARGIDLERISHVINYDMPNDTDSYVHRIGRTGRAGRDGVSIALVPLKEMGFL
RVVERATRSKLEEIFMPTAQELSAGRIEKFKARVLGAVEKNTSLEKYRDAILEIKEETGL
ETETLLAALTLIAQGNKTFFPREIQAKQEKERSPRERKPRDRGENNSRFESKQDRKPRKS
RVPSDINLSTYRVDVGRDNDIAPRNIVGAIANEGGIDSKYICNISIQKDHTLVDLPANLP
PKVINHLKKIWVAGKKLNISQIN
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggattctgaaattaaaaaagattttcaatcattaggattgaatgaagatattatatct
acagttaagtcattgggttatgaaaacccaacgccaattcaacaatatgcaataccttat
gttttatcaggtagagatgtattgggtcaggcacaaacgggtacgggtaagacagcagct
tttgcattacctcttattaataatatggatttaagttcaaatagtaggttgccgcaagta
ttagtactagctcctactagagaattagctattcaagtagcagagcagtttgaagcattc
tcaaaaagaattccaaatttagaagttgtatctatatatggtggtcaagagtatggtggc
caaataagagctttaaaagaaggcgtgcaagtagtagttggtactgctggcagagttatg
gaccatataaagaaaggaacacttaaactagaaggtttaaaaacactagttttagatgaa
gctgatgaaatgttaagaatgggctttattgacgatgttaaatgggtattaagtcatata
gatgacagttgtcaaagattattattttcagctacaattccatctgatattgcaaatatt
ataaaagaacaccttagaaatccttgtaaaattcaagttaagtctaagacagaaactgct
aatacaattacacaaaaatttatagttattaaaggctttaagaaaatagatgcacttgat
aggattcttgaaacagaagaaactgatggagtaatcatatttgttaagactaaaacaagt
actatagaagttgcagataatttgaaagctttaggatataaagttgcggctataaatggt
gatatgcaacaaaatcaaagagaatacataattgaacagtttaagaatggtaattctagc
atattagttgctacagatgtagttgctagaggtatagacttagaaagaattagtcatgta
ataaactatgatatgccaaatgatacagactcatatgttcatagaataggcagaactggt
agagcaggccgtgatggagtatctatcgcactagttccattaaaagagatgggcttttta
agagtagttgaaagagcaacccgttcaaagcttgaagaaatatttatgcctacagctcag
gaactttctgctggtagaatagaaaaatttaaggctagagtattaggcgctgtcgaaaaa
aatactagcttagaaaaatatagagatgctattttagaaattaaagaagaaactggttta
gaaactgaaactcttttagcagcattgactttaattgctcaaggtaataagacattcttc
ccaagagaaatacaggctaagcaagaaaaagaaagatctccaagagaaagaaaaccaaga
gatagaggagaaaataactctagatttgagtcaaaacaagatagaaaacctagaaaatct
agagttccatctgatatcaacttgagtacttatagagtagatgttggacgtgataatgat
attgcacctagaaatatagttggtgcaatagctaatgaaggtggtatagatagtaaatat
atttgtaatatatctattcaaaaagaccatacattagtagatttaccagcaaatttgcct
cctaaagttataaatcacttaaagaaaatttgggttgcgggtaaaaaattaaatatttca
caaattaattaa
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