Francisella frigiditurris: KX01_150
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Entry
KX01_150 CDS
T05636
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
frc
Francisella frigiditurris
Pathway
frc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
frc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KX01_150 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
frc03021
]
KX01_150 (rpoA)
03400 DNA repair and recombination proteins [BR:
frc03400
]
KX01_150 (rpoA)
Enzymes [BR:
frc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KX01_150 (rpoA)
Transcription machinery [BR:
frc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KX01_150 (rpoA)
DNA repair and recombination proteins [BR:
frc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KX01_150 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_CTD
RNA_pol_A_bac
RNA_pol_L
HHH_XRCC3_RpoA
POLH-Rev1_HhH
RNA_pol_L_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
APC97079
UniProt:
A0A1J0KTS2
LinkDB
All DBs
Position
complement(134844..135815)
Genome browser
AA seq
323 aa
AA seq
DB search
MSKNSSKQEFIPRVELVEELGAFGYKILLSPIEKGMAHILGNSIRRVLLSSMPGASIVKV
NIKDVLHEYSTLDDVKEDVVEIISNLKQVAIGLDKDVDSVSLELNVNKSGVVTAGDFKQT
KGVSIANKDQVIATLTDKREFSLSASVLSGRNVGILSYVDVELEKVGDIAVDPDFNPIKR
ITFRVIDNGNSENLEILIKTNGTVEPFEAIKTALECFCEQISVFVSLKVPSQGRASDSLI
DSNIDPILLKPIDDLELTVRSSNCLRAENIKYLGDLVQYSESQLMKIPNLGKKSLNEIKQ
ILIDNSLSLGVHIENFREIAEGK
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaaaatagttcaaaacaagaatttatacctcgtgttgagcttgtagaagagcta
ggtgcttttggatataaaatactgttgtctcctatagaaaaaggtatggcacatatttta
ggaaattctattagaagagttttgctttcatcaatgccgggtgcttctattgttaaagtc
aatataaaagatgttttgcatgaatattcaactttagacgatgtaaaagaagatgttgtt
gagataatatcaaaccttaagcaagttgctataggtttagacaaagatgttgactctgtc
tctttagaacttaatgttaataaaagtggcgttgtaactgctggtgattttaagcaaact
aaaggtgtttctatcgcaaacaaagatcaagtaattgcaacattaacagataaaagagaa
tttagcttatcagcgtctgttctttctggaagaaatgtaggtattttgtcatatgttgat
gtggaacttgaaaaagttggagatatagctgttgatcctgattttaaccctattaaaaga
attacattcagagtaatagataatgggaatagtgaaaatctagagatacttataaaaaca
aatggtacagttgaaccatttgaagctattaaaactgctttggaatgcttctgtgagcaa
atttctgtatttgtatctctaaaagttccttctcaaggtagagcatcagattctttaata
gattcaaatatagatccaattttgcttaaaccaattgatgatttagaattaacagttaga
tcatctaattgtctaagagctgaaaatattaaatatttaggtgatttagtacagtattca
gagtctcagttaatgaagattcctaatttaggtaagaaatcactaaatgaaattaagcaa
atcttaatagataatagcctttctctaggcgttcatattgaaaactttagagaaattgct
gaaggtaaataa
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