Francisella frigiditurris: KX01_29
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Entry
KX01_29 CDS
T05636
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
frc
Francisella frigiditurris
Brite
KEGG Orthology (KO) [BR:
frc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
frc03032
]
KX01_29 (topA)
03400 DNA repair and recombination proteins [BR:
frc03400
]
KX01_29 (topA)
Enzymes [BR:
frc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
KX01_29 (topA)
DNA replication proteins [BR:
frc03032
]
Prokaryotic type
DNA Topoisomerases
KX01_29 (topA)
DNA repair and recombination proteins [BR:
frc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
KX01_29 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DNA_ligase_ZBD
FOP_dimer
Toprim_2
Toprim_4
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
APC96233
UniProt:
A0A1J0KR63
LinkDB
All DBs
Position
29018..31309
Genome browser
AA seq
763 aa
AA seq
DB search
MAKNLVIVESPAKIKTIQKYLGKDFDILASFGHVREIPSKDTSIDVEDNFKIKYVVNDKS
KKHIDAIKKAAKNSENIYLATDPDREGEAISWHVQEILKNAKLLKDKKVYRVTFNEITKS
AVTNALANPKELSMSLVNAQKARQALDFLVGFNLSPLLWRKITSGLSAGRVQSPALRMIV
EREIEREEFVKKDYWSITAELQKTKLFTAGLTEFDNNKVEQFTFTTEKAVESAKTKIAKD
ANGFLIVDGISEKKIRRNPYAPFTTSTLMQEASKKLGFNAKRTASVAQKLYEGKDVGNGE
SVGLITYMRTDSTNLSQDALNDIRGFIEQKYDSGMLPSSPRIFTKKAENAQEAHEAIRVT
AAAREPEMIKQYLTADEYKLYTLIWKRTMACQMKHATLNSTSIDLTTENKKHKFKATGTV
IVDAGFLSVYQAEKDEDEKDEDDGIILPKVEEGQKIPLKDIIVKAHSTEPPPRYTEASLI
KTLEKYGIGRPSTYPVIISTLQQREYVDTDNKRFIPTDKGRVVNKFLTEYFKKYVEYSYT
AGLEKELDEIAQDKNDYLSVLNAFWKPFIEKIGKISEEVSRKDVVQEELDEDCPECGSKL
SLRLGKNGRFIGCTNYPTCKYTRPLENSSTEKKEEKPEPTVVADRKCPECGSDLHIKQGK
YGKFIGCSNYPKCKHMEPLEKPKDTGIVCPKCNKNHIVEKKSRKGKVFYACDGFPKCKNA
YWYPPINEKCPKCNYPILLHKTTKKDGEQKVCANEECDFTVSL
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaacttagtgatcgtagagtcccctgcgaaaatcaaaactatacagaagtat
ttaggaaaagattttgatattttggcatcgtttggccatgttagagaaataccttctaaa
gacacttcaatagatgttgaagataattttaaaattaaatatgttgtaaatgacaaaagt
aaaaagcacatagatgctataaaaaaagctgcaaaaaattctgaaaatatatatcttgct
accgatccagatagagagggagaagccatctcttggcatgtacaagaaatattaaagaat
gcaaaactgcttaaagataaaaaagtctatagagttacattcaatgaaataactaaatca
gctgtcacaaatgctctcgcaaatcctaaagaattatcaatgtcattggtaaatgctcaa
aaggcaagacaagcactagactttttagttggatttaatttgtctcctttattatggaga
aaaattactagtggtttatcagctggtagagtacaaagccctgctcttagaatgatcgtt
gaaagagagatcgaaagagaagagtttgtaaaaaaagattactggagcattactgctgaa
ctacaaaagactaaactttttacagctggtctaacagaatttgataataataaagttgaa
caatttacttttactacagaaaaagctgtagagtctgcaaaaacaaaaatagctaaagat
gctaatggttttcttatagttgatggaatttcagagaaaaaaattcgtagaaatccatat
gctccattcacaacatctactttaatgcaagaagcatctaaaaaacttggctttaatgcg
aaaagaacagcttcagtagctcaaaaattatatgaaggtaaagatgtaggtaatggagaa
tctgtaggtttgattacatatatgagaacagactcaacaaacttatctcaagatgctcta
aatgatattcgcggattcatcgaacaaaaatatgactcaggcatgctcccatcaagccct
cgcatttttactaaaaaagctgaaaatgctcaagaggcacatgaggctatccgagtaaca
gccgcagctcgtgaaccagagatgataaaacagtatctaacagctgatgaatataagctt
tatactttaatatggaaaaggactatggcatgccaaatgaaacatgccacattaaatagt
acatctattgatcttactacagaaaataaaaaacataagtttaaagctactggcacagtt
attgttgatgctggtttcctaagtgtttatcaagcagaaaaagatgaagatgaaaaagat
gaagatgatggaataatacttcctaaagttgaagaaggacaaaaaatcccattaaaagat
atcattgtaaaagctcactcaactgaaccacctccaagatatacagaggcatctctaatt
aaaactttagagaaatatggtattggtcgtccttcaacttatcctgttatcatatctaca
ctacaacaaagagaatatgttgatactgataataaaagatttatcccaacagacaaaggt
cgtgtagtaaataaatttttaacagaatatttcaaaaaatatgttgaatattcatataca
gcaggtcttgaaaaagagctagatgaaattgctcaagacaaaaatgattatttaagtgtt
ttaaatgctttttggaaaccatttatcgaaaaaattggaaaaatctctgaagaagtttca
agaaaagatgtagttcaagaggaattagatgaagattgtccagaatgtggaagtaagctt
tcactaaggttaggtaaaaatggtcgcttcattggttgcaccaactaccctacttgtaaa
tatactcgtccattagaaaatagctcaacagagaaaaaagaagaaaaacctgagccaaca
gttgttgcagatagaaagtgcccagaatgtggctctgacttacatataaaacaaggcaag
tatggaaaattcataggatgctctaattatccaaaatgtaaacatatggagcctctagaa
aaacctaaagatactggaatagtttgtccaaagtgcaacaaaaaccacatcgtagagaaa
aaatctcgtaaagggaaggtattctatgcatgtgatggttttccaaaatgtaaaaatgct
tactggtatcctcctataaatgaaaaatgccctaaatgtaactatccaatcttattacat
aaaacaactaagaaggatggggagcaaaaagtttgtgccaatgaggaatgtgatttcaca
gtttctttatga
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