Parafrankia sp. EAN1pec: Franean1_0006
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Entry
Franean1_0006 CDS
T00608
Name
(GenBank) DNA gyrase, B subunit
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fre03032
]
Franean1_0006
03400 DNA repair and recombination proteins [BR:
fre03400
]
Franean1_0006
Enzymes [BR:
fre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Franean1_0006
DNA replication proteins [BR:
fre03032
]
Prokaryotic type
DNA Topoisomerases
Franean1_0006
DNA repair and recombination proteins [BR:
fre03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Franean1_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
ABW09475
LinkDB
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Position
7555..9513
Genome browser
AA seq
652 aa
AA seq
DB search
MAYDASSIKVLEGLEAVRKRPGMYIGSTGERGLHHLVYEVVDNAVDEALAGYCDTISVTL
LADGGVRVTDNGRGIPVGEHPVKKIPTVELVLTTLHAGGKFDGESYAVSGGLHGVGVSVV
NALSTRLDVEIQTDGHSWFQPYENSRPARPLAQTGTSKKTGTTITFWADPTIFETTTYKY
ETLFRRLQEMAFLNKGLSITLRDERGKATETEEAAEPTEVTFKYDNGLVDFVGHLNATKD
AVHRSVISLESKGTGIEAELAMQWNSGYNESVYTFANTINTHEGGTHEEGFRAALTSAVN
AYAKDQNLLKPVKAGSKNSDERLSGDDIREGLTAIISVKLAQPQFEGQTKTKLGNTEAKK
FVQEMCYSALKDWFEVNRTEARSIVSKALDAQRARIAARQARDLTRRKGLLGGTGLPGKL
ADCQFTDPERCELYIVEGDSAGGSAKGGRDSKFQAILPLRGKILNVEKARIDRVLKNTEV
QALIQALGCGIHDDFDIAKLRYHKIVLMADADVDGQHIRTLLLTLLFRFMRPLVEAGHVF
LAQPPLYKIKWGREDWEYAYSDRERDGLLEQGVEAGRKLPKDAIQRFKGLGEMNATELWD
TTMDPDKRILLQVTLDDAAVADELFSVLMGEDVDARRSFIQRNAKDVRFLDI
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
gtggcctacgacgctagttcgatcaaggttctcgagggtctcgaagcggtacgcaagcgc
cccggcatgtacatcggctccaccggggagcggggcctgcaccacctggtctacgaggtc
gtggacaacgcggtggacgaggcgctcgcgggctactgcgacacgatcagcgtgaccctg
ctggccgacggcggcgtacgcgtcacggacaacggccgcgggatcccggtcggcgaacac
cccgtcaagaagatcccgaccgtcgagctggtgctcaccacgctgcacgccggcggcaag
ttcgacggcgagtcgtacgcggtctccggtggtctgcacggcgtcggcgtgagcgtcgtg
aacgcgctgtcgacccgactcgacgtcgagatccagaccgacgggcacagctggttccag
ccctacgagaactcccgtccggcgcggccgctggcgcagaccggcacgtcgaagaagacc
ggtacgaccatcacgttctgggccgaccccacgattttcgagaccaccacgtacaagtac
gagacgctcttccgtcgcctccaggagatggcgttcctgaacaagggcctgtcgatcacc
ctgcgggacgagcgcggcaaggccacggagacggaggaggcggccgagccgaccgaggtc
acgttcaagtacgacaacggcctggtcgacttcgtcggtcacctcaacgcgaccaaggac
gccgtccaccgcagcgtcatctcgctggagtccaagggcaccggcatcgaggccgagctc
gcgatgcagtggaactccggctacaacgagtcggtctacaccttcgcgaacacgattaac
acgcacgagggcggaacccacgaagagggcttccgggccgccctcaccagcgcggtcaac
gcctacgcgaaggaccagaacctcctcaagccggtcaaggccggctcgaagaactccgac
gagcggctctccggcgacgacatccgggagggcctcaccgcgatcatctcggtgaagctc
gcgcagccgcagttcgagggccagaccaagacgaagctcggcaacaccgaggccaagaag
ttcgtccaggagatgtgctactcggcgctcaaggactggttcgaggtcaaccgcaccgag
gcccgctcgatcgtcagcaaggcgctcgacgcgcagcgcgcccgcatcgccgcccgccag
gcccgtgacctcacccggcgcaagggcctgctcggcgggacgggcctgcccggcaagctc
gccgactgccagttcaccgaccccgagcggtgcgagctgtacatcgtcgagggtgactcg
gccggcggctcggccaagggcggtcgtgactcgaagttccaggcgatcctgccgctacgc
gggaagatcctgaacgtggagaaggcccgcatcgaccgggtcctgaagaacaccgaggtc
caggcgctcatccaggcgttgggctgcggtatccacgacgacttcgacatcgccaagctg
cgctatcacaagatcgtgctgatggcggacgccgacgtcgacggccagcacatccgcacc
ctgctgctcaccctgctgttccggttcatgcgcccgctcgtcgaggccgggcacgtcttc
ctcgcgcagcccccgctctacaagatcaagtggggtcgtgaggactgggagtacgcctac
tccgaccgggagcgcgacggcctgctcgaacagggcgtcgaggccggccgcaaactgccc
aaggacgcgatccagcgattcaagggtctcggcgagatgaacgccaccgagctctgggac
accaccatggacccggacaagcggatcctgctccaggtgacgctcgacgacgccgccgtc
gccgacgaactgttctcggtcctgatgggcgaggacgtcgacgcgcggcgcagcttcatc
cagcgcaacgcgaaggatgtgcgtttcctggacatctga
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