Parafrankia sp. EAN1pec: Franean1_0156
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Entry
Franean1_0156 CDS
T00608
Name
(GenBank) Substrate-binding region of ABC-type glycine betaine transport system
KO
K05845
osmoprotectant transport system substrate-binding protein
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Franean1_0156
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
fre02000
]
Franean1_0156
Transporters [BR:
fre02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Osmoprotectant transporter
Franean1_0156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
ABW09623
LinkDB
All DBs
Position
complement(186804..187838)
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AA seq
344 aa
AA seq
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MGSANVSEPTSVAAEAGQAVHRRTRRTRRIRPCPRRAGRRRVGAAAAAMLALALTTAACG
DGSGGASLGSLTVADAGFTESKILADMYGELLTNAGYKVERTSVQSTEIAQSSLESGQID
AMPQYVATYADLLNSQVNGSGATSVSSSDLNASLAGLRRLAKGLGLSVLEPADAVDQNAF
AVSRSFAAEHHLTTLTDLGASGLTVKLAAGAECATRPFCQPGLEKTYGIKISEIVETGVA
TAQTKAAVRDNTAQLGLVLTTDATVNGYNLVVLTDDKKLQNADNLVPIVNTDSLAPEITS
ALNALAPVLTTADLAELNKRVDAEREKSEEVAHDFLAEKGLLDS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atggggtcggcgaacgtgagcgaaccaacgtcggtggcggcagaggctgggcaggccgtg
caccggcgcacccggcgcacccgacggatccgcccgtgcccgcgccgtgccggccggcgc
cgggtgggcgccgcggcggcggccatgctagctctcgcgctgaccactgcggcctgcggc
gacggctccggcggcgccagccttggttcgctcaccgtcgccgacgccggtttcaccgag
agcaagatcctcgccgacatgtacggcgaactgctcaccaacgccggctacaaggtcgag
cggacctcggtgcagagcaccgagatcgcccagtcctccctggagagcgggcagatcgac
gccatgccgcagtatgtggcgacctacgccgacctgctgaactcccaggtcaacggctcc
ggagccacctcggtctcgtcgtcggacctgaacgcgtcgctggccggactgcgccgcctc
gcgaaggggctgggcctgagcgtgctcgagccggccgacgcggtcgaccagaatgccttc
gcggtgagcaggtcctttgccgcggagcaccacctgacgaccctgaccgacctgggtgcc
agtggcctgacggtgaagctcgctgcgggcgccgagtgcgcgacccgcccgttctgccag
cccgggttggagaagacctacgggatcaagatctccgagatcgtcgaaaccggtgtggcg
accgcccagaccaaggccgcggtacgggacaacaccgcgcagctcggcctggtgctcacc
accgacgccaccgtcaacggctacaacctggtcgtgctgaccgacgacaagaagctccag
aacgccgacaatctggtgccgatcgtgaacaccgactcgctcgccccggagatcacctcg
gcactgaacgcgctggcgccggtgctcacgacggcggacctggccgagctgaacaagagg
gtggacgcggagcgggagaagtccgaggaggtcgcgcacgacttcctggccgagaagggc
ctgctggacagctga
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