Frankia sp. EAN1pec: Franean1_0573
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Entry
Franean1_0573 CDS
T00608
Name
(GenBank) transcriptional activator domain
Organism
fre
Frankia sp. EAN1pec
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
nSTAND1
BTAD
WD40
AAA_16
Trans_reg_C
PD40
eIF2A
Cytochrom_D1
AAA_22
SPO11_like
SNARE
EspA
Motif
Other DBs
NCBI-ProteinID:
ABW10032
RhizoBase:
Franean1_0573
UniProt:
A8KXC9
LinkDB
All DBs
Position
complement(660451..665550)
Genome browser
AA seq
1699 aa
AA seq
DB search
MLDEGIGAAGDEPSVQNRTPPAGGRPAGLSFQVLGPLEVRRGGTPVQLRGTRERTLLAIL
LSERNRAVPLSRLVTGLWGAQPPASAERTVQAYVARLRPMLEPERPEAGWSVLVTSPTGY
CLRVDDAAFDAASFARLVDRAQSALVAGAPDLALTRFRRAEAMWRGDEPYQDLADVAYLT
PERDRLIELRLTAAADRLDAERALGRAAGTVGDLRRLVADHPTNERFWGQLMVALYESQR
QKEALDTYRAAWTRLVDDGGIEPGPKLRALHDTIVSQRPVEVAWPVRPGDVPAPLSADRT
PLIGRDGAQRWLRDVWDQVLDDVGRLVVVEAEPGGGASRLLAEFARTVAARGAVVETTLT
PALTTQVAQRPVLVVVDQPAGPEPAEAVPAGLGPAGAESAGVGPAGRGPAWVKRVAAAVG
GSGRPVLVVVVVAASDRAAHPDEWADAVPAERVLRLGPLGGDAVGNIVAGYVQPADLDEA
TSVILDTAGGNPARVHEAAARWAAERARAQAGRSAERMAAVHRTLAQAEQEMLDDVTDLQ
RVRASRAPGPDTVVCPYKGLARFDEADAAYFFGRQRLIAQLVTGCVAAPLLTVVGPSGSG
KSSVVRAGLLPALRAGALPGSERWRYTPLRTGATDEAALRAVLRDGGAEDPDGTDLLVLD
QFEEAFTAWSPATRTAVVDWLVGELELRDGRLRVVITVRADYYGRFAHHPTLARLIGRNT
LLVGPMTDDELSQAIEQPARVAGLGVEDGFVAAVLGDAKHEPGALPLLSTALLATWERRD
GRMLRTAAYREAGGVAGAVTRLAEDVYKGLDPGEQAIARRLLLRLVSPGEDGLDVRRRAA
RDELVDSDAADRILTLLVERRLVTADDDTVEVAHEALLRAWPRLRGWLEADRDGRRLHRQ
LTEAAAAWQRSDQDPGYLYHGTRLHALQEWAQANPGDANALERLFLAASVAVEERQLRDA
RRSARRSRSWASVLAILLVVALTMTVLAVVQWSAANQQANVAREATTLSQAGRLATLAAN
LGPDQVDLALLLGVQGYQLAPSRDTEGGLQAALARTPANLDQIIRFPSSSFLPAVVPPSV
SPDGRLVAAPGQDGTVRLWDLHAARIVRELHWPTGRQLAVFSADASMLAVGGSDGKVVVW
EVATGRQVGAPIPAGTGLAYGQFDPRDPDRFFAVDNSGQIVAWDRSVPERPRQLGQPLRF
PAAPGEIPIFVLNATGTRMAAGAYGRPTTRVWDIDSGAVLRDLAGAPGFFGADGVTLPTS
LRDRVTLWDVNTGLAKQELTGLSGAAPGIVLSQNLRRLAVNDGGNAIRIFDVGSGREQVT
LSAAGRASTPVAFLADGRLMTSGAAEADIWRLDRGGSPLGFTLAGHDGRVTGSFTASGTE
VITQGLDDHRVLVWDAADGRELGPLLNGAVSAPVALSPDGARIVGVGANGVLRLWDRAGK
TELAVLAPADHPAAVEWSPAGDRVAAVHAGGVLLWDVGDPHRPRLVADLDTAGSTGSTGQ
PRPAFSPDGQRLAVTDQQGHRITMFDAATGRSVWLRQLETADQATLAFSPDSTKIAIGFG
TIASGFVEFLDTSDGTVRRHLNTTSVGGVAFLRDGDLVMTTSDTGDQSSVQLWDATTTAS
VGEPATQAHGAGILARSPDGMSVVAGSDRGIAQVWHVDLPEWMATACRIAGRNLTRVEWE
RYLPGEPYRASCAQWPPTP
NT seq
5100 nt
NT seq
+upstream
nt +downstream
nt
atgctcgacgagggcatcggcgcggcgggcgacgaaccgagcgtgcagaaccgaaccccg
ccggccggtggccggccggcggggctgtcgttccaggtgctcgggccgttggaagttcgc
cggggcggcacacccgtccagctgcgcggtacccgcgaacgcacactcctggccatcctg
ctgtccgagcgaaaccgtgcggttccgttgtcccggttggtcaccggtctgtggggagca
cagccgccggccagcgccgaacggacggtgcaggcctacgtcgcccggctccgcccgatg
ctcgaaccagagcggcccgaggccggctggtcggtgctggtcacctcaccgacggggtac
tgcctgcgggtcgacgacgccgcgttcgacgcggcgtcgttcgcgcggctggtcgaccgc
gcgcagtcggctctggtggccggggcaccggacctcgcactgacccggttccgtcgggcg
gaggcgatgtggcggggcgatgagccctaccaggacctggcagacgtcgcctacctcacc
ccggagcgggaccggctcatcgaactccggctcaccgcggctgctgaccggctcgacgcc
gaacgcgccctcggccgtgccgcgggtacggtcggcgacctacggcgcctggtcgcggac
catccgaccaacgagcggttctggggccagctgatggtggcgctctacgagtcgcagcgg
cagaaggaggcactcgacacctatcgcgccgcgtggacgcggctggtcgacgacggtggc
atcgagccagggccgaagctgcgagcgttgcacgacacgatcgtttcgcagcggcccgtc
gaggtcgcctggccggtacgaccgggcgatgtcccggctccactgagtgccgaccgcacc
ccgttgatcggcagggacggggcccaacgctggctgcgggacgtgtgggaccaggtactc
gatgacgtgggcaggctggtcgtcgtcgaggccgaaccgggcggcggagccagccgcctg
ctggcggagttcgcacggacggtggcggcgcgcggcgccgtcgtcgagacgaccttgacg
cccgcgctcacgacgcaggtggcgcaacgtcccgtgcttgtcgtcgtagaccagccagcc
ggcccggaacccgcggaggctgtgccagccgggctggggccagccggggcggagtccgcg
ggggtcgggccggctgggagggggcccgcgtgggtgaagcgggtggctgccgcggtcggg
gggagcggccgcccggtactggttgtcgtggtggtggccgcctccgaccgggccgcccac
ccggacgagtgggctgacgcggtccccgccgagcgggtgctgcgactcgggcccctaggg
ggcgacgcggtcggcaacatcgtggcgggctacgtccaacccgccgacctggacgaggcg
acctcggtgatcctcgacaccgcgggtggcaacccggccagggtccacgaggcggcggcg
cgatgggccgccgagcgggcgagagcccaggccggccgctcagccgagcggatggccgcg
gtccaccggacactggcgcaggccgagcaggagatgctcgacgacgtcaccgacctgcag
cgggtgagagcctcccgagccccggggcctgacaccgtcgtgtgcccgtacaagggcctg
gcccgcttcgacgaggcggacgccgcctacttcttcggccggcaacggctgatcgcccag
ctggtcaccgggtgcgtcgccgcgccgctgctcacggtcgtcggcccctccggaagcggg
aagtcgtccgtggtccgcgctggactgctccccgcgctgcgtgcgggtgcgctgcccggc
agcgagcgatggcggtatacgccgctgcggaccggcgcgaccgatgaggcggcactgcgc
gcggtgctgcgggacggcggcgcagaagaccccgacggcaccgacctgctggtgttggac
cagttcgaggaggccttcaccgcctggtcgccggcgacgcgcaccgctgtggtggactgg
ctggtcggtgagctcgagctgcgggacgggcggctgcgcgtcgtcatcaccgtgcgggcc
gactactacggccgtttcgcccatcatccgacgctcgctcgcctcatcgggcgtaacact
ctgctggtcggcccgatgaccgacgacgaactctcccaggcgatcgagcagcccgcccgg
gtcgctggcctgggcgtggaggacgggttcgtggcggcggtgctcggcgatgccaagcac
gaaccgggcgcgctgccgttgctgtcaaccgccctgctggcgacctgggaacgccgtgac
ggccggatgctgcggaccgcggcgtaccgggaggctggtggcgtcgccggagcggtcacc
cggcttgccgaagacgtctacaagggcctggaccccggcgaacaggcgatcgcccgccgg
ctgctcctcaggctggtcagccccggcgaggacggcctggatgtgaggcggcgggccgcc
cgcgacgagctcgtggacagcgacgccgccgaccgcatcctcaccctgctggtcgagcgg
cggctggtcaccgctgacgacgacaccgtcgaggtggcgcacgaggcgctgctgcgcgcg
tggccacgcctgcggggctggctggaggctgaccgcgatggccgtcgtctgcaccgccag
ctcaccgaggcggcggccgcctggcagcgcagcgaccaggacccgggctacctgtaccac
ggcacccggctgcacgccctgcaggaatgggcgcaggccaatcctggcgatgccaacgca
ctggaacgcctgttcctggccgcttcggtcgccgtcgaggagcgtcagctgcgggacgcc
cgccgctcggcgcgtcgatcacgttcctgggcgtcagtactggccattctgctcgtcgtc
gcgctgaccatgacagtgctggcggtggtgcagtggagtgcagcgaaccagcaggccaac
gtcgcccgcgaagccaccacgctgtcgcaggccggccggttggcgacgctggccgcgaat
ctggggccggaccaggtggacctggcactgctgctgggggtgcagggctaccagctcgcg
ccgtcgcgagacaccgagggcgggctgcaggccgccctcgcccgcaccccggccaacctc
gaccagatcatccggtttccgtcgtcgagtttcctgccggctgtggtgccgccctcggtg
agcccggacggtcgactggtcgccgcccccggtcaggacggcacggtccggctgtgggac
ctgcacgcagctcgtatcgtccgcgagctgcactggcccaccggccgccagctcgcggtg
ttcagcgcggacgcgtcgatgctcgcggtcggaggaagcgacggcaaggtcgtggtgtgg
gaggtcgccaccggccggcaggtgggcgctccgatcccggccggcaccgggctcgcctac
ggccagttcgacccgcgtgaccccgaccggttcttcgcggtcgacaacagcggacagatc
gtggcgtgggaccggtcggtccccgagcggccacgccagctggggcagccgctgcggttc
cccgcggcgccgggcgagataccgatcttcgtcctgaacgcgaccgggacgcggatggcc
gccggcgcatacggcaggccgacgacgcgggtgtgggacatcgactcgggtgctgtcctg
cgcgacctggcaggagcaccgggattcttcggggccgacggcgtcactctgcccacctcg
ctgcgggaccgggtgacgttgtgggacgtcaacaccgggctggcgaaacaggaactgacg
ggcctgtcgggagcggctccgggcattgtcctcagccagaacctacgacggctcgccgtg
aacgacggaggcaacgccatccggatcttcgacgttggctcggggcgggagcaggtcacg
ctgtcggctgccggccgggcgtccactcccgtcgcgttcctcgctgacgggcggctgatg
accagcggagccgccgaggcggacatctggcgcctcgaccggggcggctcaccgctgggg
ttcacgctggcaggccacgacggcagagttaccggcagcttcacggcgagcgggaccgag
gtcatcacgcagggcttggacgaccaccgggtcctggtgtgggacgcggctgacggacgc
gagctgggccctctgctcaacggcgcggtgtccgctccagtcgcgctcagccccgacggc
gcccggatcgtcggggtgggtgccaacggcgtgctgcggctctgggaccgggccgggaaa
accgaactggcggtgctcgccccggcggaccatccggcggcagtggagtggagcccggcg
ggtgaccgggtcgccgccgttcacgcgggcggggtgctgctgtgggacgtcggcgaccca
caccggccacggctggtcgcggacctcgacaccgccggctccaccggctccaccggccag
ccgcggccggcgttcagccccgacgggcagcggctcgctgtcacggaccaacagggccac
cggatcacgatgttcgacgccgcgactggccgctcggtgtggttgcggcaactggagacc
gcggaccaggcgacgttggcgttctcgccggacagcacgaagatcgccatcggcttcggc
accatagcttctggtttcgtcgagttcctggacacctccgacggtacggtgcgccggcat
ctcaacaccacaagcgtgggaggcgtggccttcctgcgcgacggcgatctggtcatgacg
acgagtgacaccggtgaccagagctccgtgcagctgtgggacgccacgacgacggcctcc
gtcggggaaccggcgacgcaggcccatggcgcgggcattctggcccgcagccctgacggg
atgtcggtggtggccggctccgacaggggcatcgcgcaggtgtggcacgtcgacctgccg
gaatggatggcgaccgcgtgccggatcgccggccggaacctgacgagggtggaatgggag
cgctacctgcccggtgagccgtaccgggccagctgcgctcaatggccgcccaccccctga
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