Parafrankia sp. EAN1pec: Franean1_0609
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Entry
Franean1_0609 CDS
T00608
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00300
Lysine biosynthesis
fre00470
D-Amino acid metabolism
fre01100
Metabolic pathways
fre01110
Biosynthesis of secondary metabolites
fre01120
Microbial metabolism in diverse environments
fre01230
Biosynthesis of amino acids
Module
fre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Franean1_0609
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Franean1_0609
Enzymes [BR:
fre01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Franean1_0609
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABW10068
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All DBs
Position
complement(707259..708572)
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AA seq
437 aa
AA seq
DB search
MDEFSYRDGTLWCEQTELREVAEKFGTPTYVYSAATLVDHYVRFAKAFESINPLICFSAK
ALSNVHLLRLLAGQGAGIDTVSGGELHRALVAGVDPERIVLAGVGKSVDELRAAVRHDIR
CINVESEAEVELLARVAREEDRRPRLAIRVNPDIAPDMRTPARTTTAIRGAKFGVDIERA
AALFRAASTDEFLRAEGFHVHIGSPIFDPRVYATALDRILALTAGLEADGHSVTTLNVGG
GFPAEYTEGSAPGWDDFAEAICPRLQGFVDRGGQVVFEPGRTIAANAGILLATVRYRKRA
GDRELVVIDAGMTHIVRAAMYDSYHFMWPVTPVNGTVPRSRDQQSIDDLVDYDVVGPICE
SSDYLAKGRALPAMVSGDLIAIFSAGAYGMTMTSNYNSQLRPAEVLVRGGRADLIRRRET
YDDLVALELLDGLTPPL
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggacgagttctcctatcgcgacggcacgttgtggtgtgagcagacagagctacgcgag
gtggccgaaaaattcggtacgccgacctatgtctactctgcggcgaccctcgtcgatcac
tatgtgcggttcgcgaaggcgttcgagtcgatcaacccgctcatctgtttctccgcgaaa
gcgctgagcaatgttcacctgctccggctgctcgccgggcagggcgccggcatcgacacg
gtgagtggcggcgagctgcaccgcgcgctggtcgccggggtcgacccggagcggatcgtg
ctggccggggtgggcaagtccgtcgacgagctgcgcgccgcggtccgccacgacatccgc
tgcatcaacgtcgagtccgaggccgaggtcgagctgctggcgcgcgtcgcgcgcgaggag
gaccgccggccgcgcctggcgatccgggtgaaccccgacatcgcgccggacatgcgcacc
cccgcccggaccaccaccgccatccgcggcgccaagttcggggtcgacatcgaacgggcc
gcggcgctgttccgggccgcctccaccgacgagttcctgcgcgccgagggcttccacgtg
cacatcggcagccccatcttcgacccgcgggtctacgcgacggcgctcgaccgcatcctg
gcactcaccgccgggctcgaggccgatgggcacagcgtcaccaccctcaacgtgggcggc
ggcttccccgccgagtacaccgagggcagcgccccgggctgggacgacttcgcggaggcg
atctgcccccggctgcagggctttgtcgaccgcggcgggcaggtcgtcttcgaaccgggc
cggacgatcgcggccaacgccggcatcctgctcgccaccgtccgttaccgcaagcgcgcg
ggcgaccgcgagctcgtcgtgatcgacgccgggatgacacatatagtccgcgctgcgatg
tacgacagctaccacttcatgtggccggtgactccggtgaacggcaccgttccccgctca
cgggaccagcagtcgatcgatgacctcgtcgactacgacgtggtcggcccgatctgcgag
tcgagcgactatctggcaaaaggccgggccctgccggcgatggtttccggggatctcatc
gcgatcttcagtgcgggtgcctacggaatgactatgacgagtaactacaacagccagctc
cggccggccgaggttctcgtccgcggcggccgggcggatctcatccgccgccgcgagacc
tacgacgacctcgtcgccctcgagctcctcgacggcctgaccccaccactctga
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