Parafrankia sp. EAN1pec: Franean1_0666
Help
Entry
Franean1_0666 CDS
T00608
Name
(GenBank) GAF sensor hybrid histidine kinase
Organism
fre
Parafrankia sp. EAN1pec
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAMP
HAMP_2
HATPase_c
Response_reg
HisKA
GAF_2
GAF
Laminin_II
ATG17_like
DUF883
Motif
Other DBs
NCBI-ProteinID:
ABW10125
LinkDB
All DBs
Position
783662..787864
Genome browser
AA seq
1400 aa
AA seq
DB search
MSADASPDRQQFPASAGDSGGPPAGATATLPVNGTGTGAATGPGGGTDALLSSLLTGLDR
LVDGEFGVRLPIGDGVGGDVARRFNELAGMQERHAREVSRVSKVIRRDGRLTLRMDDLGG
SGGWDELTLSVNSLIDDLARPTHEVARVIAAVAEGDLSQQMALEIAGQPVRGEFLRIGTT
VNTMVDQLSSFADEVTRVAKEVGTEGNLGGQAKVMGVSGVWRDLTESVNSMAGNLTSQVR
NIAQVTTAVAQGDLSQKITVDARGEIHELKSTVNTMVDQLSAFADEVTRMAKEVGTEGKL
GGQAQVKGVSGVWRDLTDSVNVMAGNLTTQVRSIAEVAAAVARGDLTRQITVDARGEVAG
LAHTLNTMVDQLSSFADEVTRVAWEVGTEGNLGGQAHVRGVSGVWRDLTESVNSMAGNLT
SQVRNIALVATAVARGDLSQKITVTAQGEILELKETLNTMVDQLSSFADEVTRVAKEVGT
EGNLGGQAHVRGVSGVWRDLTESVNSMAGNLTSQVRNISAVTRAVARGDLSQKITVTAQG
EIAELKDTVNTMVDQLSSFAAEITRVGREVGVEGKLGGQATVAGVAGTWKDLTDNVNQLA
STLTIQLRAIGDVSTAVTRGDLTRSITVEAEGEVAELKDNINQMIARLRETTEVNAQQDW
LKSNLALIGSKMQGQRDLYTVCQMIISEMTPAVNAQQGTVYLLDFIEGDKLRYVAGYGSV
PRRRSDGTFLFGEGLIGQAALEKKRIRVEDVPAGYLNIRSGLGEAPPCDLVVVPVIFENQ
VLGVIELASFTPFSDLHLTLVDQLVDTIGVVLNTIMANARTEELLAQSQRLTQELRSQSV
ELQRTNNELEEKAALLEEKNQEIELARIGLEEKAEQLALSSQYKSEFLANMSHELRTPLN
SLLILAKLLADNPDHNLSQKQIDFAETIHSAGSELLGLINDILDLSKVEAGKMNVDAGPV
RTAALCDAVAGVFGPTAEEKGLTFEISVTEDVPDEFVTDEQRIQQVLKNLLSNAVKFTDA
GTVRLDVAVASPDTPFVAPSLRSAPMVLSFAVTDTGIGVAAEKLRMIFEAFQQADGTTSR
RYGGTGLGLSISKEIARLLGGSIAVSSQIGQGSTFTLFVPSVMPPEAPAGPHPGEPDGVL
MIVDGAVQPRSRTDGGDDGRGPVLAGVERAALVPAERRPAAPESPGDAAHRESAGPAPAG
TSNGAGTGRQRDGERVYGAPGRPVEPKAARRLARTSWSGRGGTDAAGDRTPAEGTPFLTD
PQAPARPPTTNLDGGDPLVGASILVVDDDVRNVFALTSALEMHGMRVLYADNGHDAIRML
QQDNAPVHLVLMDVMLPGMDGNETTSEIRAMPAFAALPILVLTAKAMPGDREKSISAGAS
DYITKPVDLDHLLGVMRSYL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgacgcgagccccgaccgccagcagttccccgcgagtgccggggattccggt
ggcccgcccgcgggcgccacggccaccctgccggtgaacggcacgggcacgggcgccgcc
acagggcccggcggtggcacggacgccctgctctccagcctgctcaccgggctcgaccgg
ctcgtcgacggcgagttcggcgtccggctgccgatcggtgacggcgtcggcggggacgtc
gcccgccggttcaacgagctcgccgggatgcaggagcggcacgcccgcgaggtttccagg
gtgagcaaggtaattcgacgtgacggtcgtctcaccctgcgaatggacgaccttggtggc
agtggcggctgggacgagctcacgctctcggtgaactcgctcatcgacgacctggcccgg
cccacccacgaggtcgccagggtcatcgccgcggtggcggagggtgacctctcccagcag
atggcgctggagatcgccgggcagccggtgcgtggcgagttcctccggatcggcacaacc
gtcaacacgatggtggaccagctctcgtccttcgccgacgaggtcacccgggtggcgaag
gaggtcggcaccgagggcaacctcggtggccaggccaaggtcatgggggtctccggggtc
tggcgggacctgaccgagtcagtgaactcgatggccggcaacctgaccagccaggtccgc
aacatcgcccaggtgactacggcggtggcgcagggtgacctgtcgcagaagatcacggtc
gacgcgcgcggtgagatccacgagctgaagtcgaccgtcaacacgatggtggaccagctc
tccgcgttcgccgacgaggtcacccgaatggccaaggaggtcggcaccgagggcaagctc
ggtggccaggcccaggtcaagggtgtctccggggtgtggcgtgatctcaccgactcggtg
aacgtcatggccggcaacctcaccacccaggtgcgcagcatcgccgaggtcgccgccgcg
gtggcccgcggtgacctgacccgccagatcaccgtcgacgcccgcggcgaggtggcgggc
ctcgcgcacaccctgaacacgatggtcgaccagctctcgtcgttcgccgacgaggtgacc
cgggtcgcctgggaggtcggtaccgagggcaacctgggtggtcaggcgcacgttcggggg
gtctccggggtctggcgggacctgaccgagtcggtgaactcgatggccggcaacctgacc
agccaggtccgcaacatcgccctggtcgcgacggcggtggcccgtggtgacctctcgcag
aagatcaccgtcaccgcgcagggcgagatcctcgagctcaaggaaaccctgaacacgatg
gtcgaccagctctcgtcgttcgccgacgaggtgacccgggtggccaaggaggtcggtacc
gagggcaacctgggtggtcaggcgcacgttcggggggtctccggggtctggcgggacctg
accgagtcggtgaactcgatggccggcaacctgaccagccaggtccgcaacatctccgcg
gtgaccagggcggtggcccgcggtgatctctcgcagaagatcacggtcaccgcgcagggc
gagatcgccgagctgaaggacaccgtcaacacgatggtcgaccagctctcgtccttcgcg
gccgagatcacccgggtcggccgcgaggtgggcgtcgagggcaagctgggcggccaggcc
acggtcgccggtgtcgcgggcacctggaaggacctgaccgacaacgtcaaccagctcgcg
tcgacgctgacgatccagctccgcgcgatcggcgacgtgtccaccgcggtgacccgcggt
gacctgacccgctccatcacggtggaggccgagggcgaggtcgccgagctcaaggacaac
atcaaccagatgatcgcccggctgcgggagaccaccgaggtcaacgcccagcaggactgg
ctcaagtcgaacctggccctcatcggcagcaagatgcagggccagcgcgacctctacacc
gtctgccagatgatcatcagcgagatgacgccggcagtgaacgcccagcagggcacggtc
tacctgctcgacttcatcgagggcgacaagctgcgctacgtcgccggctacggctcggtg
ccgcggcgccgctcggacggaaccttcctgttcggcgagggcctcatcggccaggcggcg
ctggagaagaagcgcatccgggtcgaggacgtgcccgccggctacctcaacatccgcagc
ggcctgggcgaggcgccgccgtgcgacctggtcgtcgttccggtcatcttcgagaaccag
gttctcggtgtgatcgaactggcctctttcaccccgttctccgacctgcacctcacgctc
gtcgaccagctcgtcgacaccatcggcgtcgtcctgaacacgatcatggcgaacgcccgc
accgaggagctgctcgcccagtcgcagcggctgacccaggagctgcgctcgcagtccgtc
gagctccagcgcacgaacaacgagctggaggagaaggcggcgctgctcgaggagaagaac
caggagatcgagctggcccggatcgggctggaggagaaggccgagcagctcgcgctgtcc
tcccagtacaagtcggagttcctggcgaacatgagccacgagctgcgcaccccgctgaac
agcctgctcatcctggccaagctgctggccgacaaccccgaccacaacctgagccagaag
cagatcgacttcgccgagacgatccactccgccggctcggagctgctcgggctgatcaac
gacatcctcgacctctccaaggtcgaggccggcaagatgaatgtcgacgccggcccggtg
cgcaccgccgcgctgtgcgacgcggtggcgggcgtgttcgggcccaccgccgaggagaag
ggcctcaccttcgagatcagcgtgaccgaggacgtgccggacgagttcgtcaccgacgag
cagcgcatccagcaggtgctcaagaacctgctgtcgaacgcggtcaagttcaccgatgcc
ggcaccgtccggctggacgtcgccgtcgcctcgcccgacaccccgttcgtcgcgcccagc
ctgcgctcggcgccgatggtgctgtccttcgccgtcaccgacaccggcatcggggtcgcg
gccgagaaactcaggatgatcttcgaggcattccagcaggcggacggcacgacctcgcgc
cgctacggcggtaccggcctgggactgtcgatcagcaaggagatcgcccgcctgctgggc
gggtcgatcgccgtctccagtcagatcgggcagggcagcacgttcaccctgttcgtcccg
tcggtgatgcctccggaggcacccgcgggcccccaccccggcgagcccgacggtgtcctc
atgatcgtggacggtgccgtccagccgcggtcacggaccgacggcggggacgacggccgt
gggccggtgctggccggcgtcgagcgggccgcgctcgtcccggcggagcgcaggccggcg
gcgccggagtcgcccggtgacgcggcgcaccgggagagcgccggcccggctcctgccggc
acgtccaacggggcgggcaccggcaggcagcgtgacggcgaacgggtctacggagcgccc
ggccggcccgtcgagcccaaggcggcccgccgattggcgcgcacctcgtggtcgggtcgc
ggcggcaccgacgcagccggcgaccggacgcccgccgagggcaccccgttcctcaccgac
ccacaggcgcccgcgcggccgccgacgacgaacctggacggcggcgacccgctcgtgggc
gccagcatcctggtggtcgacgacgacgtccgcaacgtgttcgccctgaccagcgcgctg
gagatgcacggcatgcgggtgctctacgccgacaacggccacgacgccatccggatgctg
cagcaggacaacgcgccggtgcacctggtgctgatggacgtcatgctcccgggcatggac
ggcaacgagaccacgtcggagatccgtgcgatgccggccttcgcggcgctgccgatcctc
gtgctgaccgcaaaggcgatgcctggtgaccgggagaagagcatttccgccggtgcgagc
gactacatcaccaagccggtagaccttgatcacctccttggagtgatgcggtcgtatctg
tga
DBGET
integrated database retrieval system
