Parafrankia sp. EAN1pec: Franean1_0874
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Entry
Franean1_0874 CDS
T00608
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
fre
Parafrankia sp. EAN1pec
Pathway
fre00300
Lysine biosynthesis
fre01100
Metabolic pathways
fre01120
Microbial metabolism in diverse environments
fre01230
Biosynthesis of amino acids
Module
fre_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Franean1_0874
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fre01002
]
Franean1_0874
Enzymes [BR:
fre01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
Franean1_0874
Peptidases and inhibitors [BR:
fre01002
]
Metallo peptidases
Family M20
Franean1_0874
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GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
ABW10330
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Position
1019560..1020690
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AA seq
376 aa
AA seq
DB search
MGLDLALPVGDLTRVLVDVPSVSGDEGTLATAVEEALRSLGGLEILRDGDAVLARTGHGL
PARVLLAGHLDTVPVADNLPARLDGSRLYGCGTSDMKAGVAVMLRLAALLGTPASGSAPE
SRPGPVSGAGAVARHDVTWVFYDNEEVAAARNGLRRLAERHRDWLQADLAILMEPTSGEI
EAGCQGTLRVVATVPGRRAHSARSWLGENAIHQAGELLSRLARYRPRSVTLDGCTYREGL
SAVRIDGGVAGNVIPDSCRVTVNFRFAPDRDPKAALAHVAEVLDGYDLVLDDSAGGAPPG
LSAPAAAAFVAATGRAPVAKYGWTDVARFAELGIPALNYGPGDPNLAHTRDEYVEVAVIE
ETERVLSSYLVGRGTP
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgggcctcgatctggcgctgcccgtcggtgatctgacgcgtgtcctcgtggacgtgccg
tcggtcagcggcgacgagggcacgctcgcgacggccgtcgaggaggcgctgcgctccctc
ggcggcctggagatcctgcgggacggcgacgcggtgctcgcgcggaccggccacggcctg
cccgcgcgggtgctgctggccggtcacctcgacacggtgcccgtcgccgacaacctcccg
gcccgcctcgacggctcccgcctgtacggctgcgggacgtccgacatgaaggccggggtg
gccgtgatgctccgcctggcggcgctcctcggcaccccggcgtcggggtcggcgcccgag
tcgaggccggggccggtctcgggggcgggggcggtcgcgcggcacgacgtcacctgggtc
ttctacgacaacgaggaggtcgcggccgcccgtaacgggctgcgccggctcgccgagcgg
caccgcgactggctccaggcggatctggcgatcctcatggagcccacctccggcgagatc
gaggcgggctgccagggcacgctgcgggtcgtggccacggtgccgggccgccgcgcgcac
tcggcccgctcctggctcggggagaacgccatccaccaggccggggagctgctgagccgg
ctggcgcggtaccggccgcggtccgtcacgctggacggctgcacctaccgggagggcctc
tcggcggtccggatcgacggcggcgtggccggcaacgtgatcccggacagctgccgggtc
acggtgaacttccgcttcgcccccgaccgggacccgaaggccgcgctggcccacgtggcc
gaggtgctggacggctacgacctggtgctcgacgacagcgccggcggggccccgcccggg
ctgtccgccccggccgcggcggccttcgtggcggccaccgggcgggccccggtggccaag
tacgggtggaccgacgtggcgcggttcgccgagctgggcataccggcgctcaactacggt
cccggcgacccgaacctggcgcacacccgcgacgagtacgtcgaggtggcggtgatcgag
gagacggagcgcgtgctcagctcctacctggtcggccgcggcacgccctga
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