Parafrankia sp. EAN1pec: Franean1_0974
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Entry
Franean1_0974 CDS
T00608
Name
(GenBank) RNA polymerase, sigma 28 subunit, FliA/WhiG family
KO
K03090
RNA polymerase sigma-B factor
Organism
fre
Parafrankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fre03021
]
Franean1_0974
Transcription machinery [BR:
fre03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Franean1_0974
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_5
MarR
HTH_Crp_2
DUF7343
MarR_2
HTH_23
Sigma70_ECF
GerE
NirdL-like_HTH
HTH_AraC
HTH_24
HTH_3
DksA-like_N
Motif
Other DBs
NCBI-ProteinID:
ABW10430
LinkDB
All DBs
Position
complement(1138756..1139886)
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AA seq
376 aa
AA seq
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MTSAGRTPTTPRTVPTNRAGDPVAALSQRGAGDITSTDIASTDIASTDIASADIASADIA
GPDVGGITGTAHEADGLTERGSGPGAEHGGPPPASAVGEQAQPDEAVDAAGAGSRSGSSG
HGAGSPDRIRARALFVRLVSLPEGDPERAALRDQLVRMHLPLVEYLARRFRNRGEPLDDL
VQVATIGLIKSVDRFDPERGVEFSTYATPTIVGEIKRHFRDKGWAIRVPRRLQELKLSLT
KATSELSQSLGRSPTVSEIARHLEMSEEEVLEGLESANAYSAVSLDAPDSGDDEAPAVAD
TLGVQDESLEGVEYRESLKPLLEKLPPREKRILLLRFFGNMTQSQIANELGISQMHVSRL
LARTLAQLRRGLLEDG
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcagccggcagaacacccaccacccctcgtacggtccccacgaaccgcgcgggc
gacccggtcgcggcactcagccagcgcggtgccggcgacatcaccagcaccgacatcgcc
agcaccgacatcgccagcaccgacatcgccagcgctgacatcgccagcgctgacatcgcc
ggccccgacgtcggcgggatcaccgggacggcgcacgaggccgacggcctgaccgaacgc
ggatccgggcctggtgccgagcacggtggtccaccgcccgcctcagccgtgggcgagcag
gcccagcccgacgaggccgtcgacgctgccggtgcgggctcccgctccggctcgtccggg
cacggcgccgggtcgccggatcggatccgggcccgcgcgctgttcgtccggctggtgtcg
ctgcccgagggggacccggaacgggccgccctgcgtgaccagctcgtccgcatgcacctt
cccctcgtcgagtacctcgcccggcggttccgaaaccgcggcgagccgctcgacgatctg
gtgcaggtcgcgaccatcgggctgatcaaatccgtcgaccggttcgacccggagcgcggg
gtcgagttctcgacctacgcgaccccgaccatcgtcggggagatcaaacggcacttccgc
gacaagggctgggcgatccgggtgccccgtcggctccaggagctcaagctctcgctgacg
aaggcgacctccgagctgtcccagtcgctgggccgctcgccgacggtcagcgagatcgcc
cgtcacctggagatgagcgaggaagaggtcctcgagggcctcgagtcggcgaacgcctac
tcggccgtctcgctggacgcgcccgactccggggacgacgaggctccggccgtcgccgac
accctgggggtgcaggacgagtcgctggagggcgtggagtaccgcgagtccctcaagccg
ctgttggagaagcttcccccgcgggagaagcgcatcctgctgctccgcttcttcggcaac
atgacccagtcgcagatcgcgaacgagctcggcatctcgcagatgcacgtgtcccggctg
ttggcccgcacgctggcccagctccgccgcgggctactggaagacggctga
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