Frankia sp. EAN1pec: Franean1_1139
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Entry
Franean1_1139 CDS
T00608
Name
(GenBank) Ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
fre
Frankia sp. EAN1pec
Brite
KEGG Orthology (KO) [BR:
fre00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fre03019
]
Franean1_1139
03009 Ribosome biogenesis [BR:
fre03009
]
Franean1_1139
03036 Chromosome and associated proteins [BR:
fre03036
]
Franean1_1139
Enzymes [BR:
fre01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
Franean1_1139
Messenger RNA biogenesis [BR:
fre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Franean1_1139
Ribosome biogenesis [BR:
fre03009
]
Eukaryotic type
90S particles
RNase
Franean1_1139
Prokaryotic type
rRNA processing factors
Franean1_1139
Chromosome and associated proteins [BR:
fre03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
Franean1_1139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
Motif
Other DBs
NCBI-ProteinID:
ABW10593
RhizoBase:
Franean1_1139
UniProt:
A8L593
LinkDB
All DBs
Position
1359075..1359995
Genome browser
AA seq
306 aa
AA seq
DB search
MSRSQSVPPPRDGLVEALDVHIDPELLDRALTHRSYAYENGGLPTNERLEFLGDAVLGLI
VTAALFRRHPDLPEGQLAKQRASVVNMRALADVARRIGTAGIGPYLLLGRGEEATGGRDK
PSILADTLEAVIGAVYLSNSLDVASGFVHRLFDPLLDEAAGRGAGLDWKTSLQEQTALLG
LGPPDYAVTEAGPDHAKRFTAFARVAGEVLGEGEGGSKKEAEQRAAAAAFAVLEKRSAVN
AEDELTAAASADPGDTAAGLGNGAAASANGAASGRASAVDGTGPASDADVDVAVRGDATP
AARDSR
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagccggtcacagtcggtccccccgccgcgggacgggttggtcgaggcgctcgacgtc
cacatcgaccccgagctgctcgaccgcgcgctgacccaccgttcgtacgcgtacgagaac
ggcgggctgcccacgaacgagcggctggagttcctcggtgacgcggtgctcggcctgatc
gtcacggccgcgctgttccgccgccatcccgacctccccgaggggcagctcgccaagcag
cgtgcctcggtggtgaacatgcgggcactggccgacgtcgcgcggcggatcggtacggcg
ggcatcgggccctacctgctcctcggccgcggcgaggaggcgaccggcgggcgggacaag
cccagcatcctggccgacacgctggaggctgtgatcggggccgtctacctttcgaacagc
ctcgacgtggcctccgggttcgtccaccggctcttcgacccactcctcgacgaggcggcc
gggcgcggcgccgggttggactggaagacctcgctgcaggagcagacggctctgctgggc
ctcggcccgcccgactatgccgtcaccgaggccggccccgatcacgcgaagcggttcacc
gcgttcgcgcgggtcgccggcgaggtgctcggcgagggtgagggcggtagcaagaaggag
gccgagcagcgcgccgcggccgccgccttcgcggtgctcgagaagcgctcggcggtgaac
gccgaggacgagctgacggccgccgcgtccgccgatccgggcgataccgccgccggtttg
ggtaacggagctgccgcttcggctaacggcgccgcgtcgggccgggcgtccgcggtggac
ggaacggggccggcgagcgatgcggacgtggacgtggcggtgaggggcgacgcgacgccg
gcggcgcgggactcccgatga
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